Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0662 ATGGAAATTGGAGGCAGAAGATTGAAAAGCAGAGAAACGATGGCCGTTGAATCGGTGACGCAATCGGCACCTCCTCCGAGATCAAGAGGAAGAACCTCTTTACTCCAAAACCCCAAGATACCCTTCGCACTTGCTCTTCTCTTTGCCGACGCCGTCCTCGTCTTTCTCATAATCGCATTTGTCCCCTATACGAAGATAGATTGGGACGCTTACATGTCACAGGTTAGCGGATTTGTAGGAGGGGAGCGAGATTACCGCAACCTCAAGGGCGACACTGGTCCTCTCGTCTACCCTGCTGGCTTTCTATACGTTTACTCTGCATTCCGGTATCTTACTGGAGGACAAGTTTACCCTGCTCAGATTTTGTTTGGATTGTTGTATATCATTAACCTGGCTATCGTTCTCGCCATCTATGTCAAGACCGATGTGGTTCCGTGGTGGGCCCTTTGCTTACTTTCTCTGTCGAAAAGAGTGCATTCTATCTTCGTGCTTCGTCTATTCAATGATTGTGTGGCCATGACACTTCTTCATGCTGCATTGCTCTTACTCATGCACCGAAGGTGGAATCTGGGGTTGATTTTGTTTAGTGGAGCTGTTTCGGTGAAGATGAATGTGCTTCTTTATGCTCCACCTTTACTGCTCCTCATGCTGAAGGCTATGGATATCACTGGTGTGTTATTGCCATTAGCTGGCGCAGCACTGGTTCAGATATTATTGGGGCTTCCTTTCCTGGTTTCATATCCAGTTGCATACATATCAAGAGCCTTCAATCTTGGCCGTGTCTTCATCCATTTCTGGTCTGTTAACTTCAAATTCATCCCTGAACCAGTATTTGTGTCCAAGGGATTTGCAATCTTTTTGTTGGCTGCTCACCTCATATCACTTGCTTCATTTGCGCATTATAGTTGGTGCAAACATGAAGGAGGGCTTTGCAACTTTCTGTATTCCAGATATGTCTTTATGAGACTGAGGTTTGcgcttttcttctcttcctctttttctaaaaaggttGGCAAGAGCAGTTCATCACCCCTCAAGATCCTTAATAAAGAACATATTGTGACAACTATGTTTGTTGGGAACTTCATCGGCATTGTATGTGCTCGGTCGTTGCATTATCAGTTCTATTCATGGTACTTCTATAGCTTACCTTACTTGCTGTGGAGAACGCATTACCCAACATTGCTACGTTTGATTTTGTTCATGGGAGTGGAGCTGTGCTGGAATATCTATCCTTCGAACAGCCTTTCCTCAGCGCTGCTTCTCTGCCTTCACTTAATTATTCTCTGGGGTTTGTGGTCTGCTCCACCTGAGTATCCTTACGCGGAAAATAAACCATCCTCTCACAAAAACAAATAG 1359 0.4386 MEIGGRRLKSRETMAVESVTQSAPPPRSRGRTSLLQNPKIPFALALLFADAVLVFLIIAFVPYTKIDWDAYMSQVSGFVGGERDYRNLKGDTGPLVYPAGFLYVYSAFRYLTGGQVYPAQILFGLLYIINLAIVLAIYVKTDVVPWWALCLLSLSKRVHSIFVLRLFNDCVAMTLLHAALLLLMHRRWNLGLILFSGAVSVKMNVLLYAPPLLLLMLKAMDITGVLLPLAGAALVQILLGLPFLVSYPVAYISRAFNLGRVFIHFWSVNFKFIPEPVFVSKGFAIFLLAAHLISLASFAHYSWCKHEGGLCNFLYSRYVFMRLRFALFFSSSFSKKVGKSSSSPLKILNKEHIVTTMFVGNFIGIVCARSLHYQFYSWYFYSLPYLLWRTHYPTLLRLILFMGVELCWNIYPSNSLSSALLLCLHLIILWGLWSAPPEYPYAENKPSSHKNK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0662 452 MobiDBLite consensus disorder prediction 1 32 - -
Ssu4g0662 452 Pfam ALG3 protein 45 418 IPR007873 GO:0000030
Ssu4g0662 452 MobiDBLite consensus disorder prediction 14 32 - -
Ssu4g0662 452 PANTHER NOT56 - RELATED 31 451 IPR007873 GO:0000030
Ssu4g0662 452 PANTHER DOL-P-MAN:MAN(5)GLCNAC(2)-PP-DOL ALPHA-1,3-MANNOSYLTRANSFERASE 31 451 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0662 14 452 Miscellaneous Gene Families AT2G47760 69.058 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0662 K03845 - gmx:100785253 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0662 4 10464487 10469947 Ssu4g0662 4 10464487 10469947 ECH