Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0656 ATGAGTCGTCATCCTGAGGTTAAGTGGGCTCAGAGAGTTGACAAGGTCTATATCACGGTGCAATTGGCTGATTCAAAAAATGCGAAAGTGGATCTTACGCCAGAGGGTATTTTTACCTTCTCTGGCAGTGCTGGTGCTGAAGACCGTCAGTATGAGCTAAAACTGGAGCTCTTTGACAAGGTTAACGTAGAGGAGAGCAAGATTAATGTAGGAGTGCGAAGCATATTCTGTGTAGTGCAGAAAGCCGAGAATGGATGGTGGAAAAGGTTACTGTGTGGAGAAGGCAAGCCTCCACATTATGTGAAAGTAGATTGGGATAAATGGGTGGATGAGGATGAAGATGATGGTGAACTGGACTTGGGAGGGATGGATTTCTCGAAATTTGGGGGGATGGGTGCTGATGCAATGGGAGGGATGGATTTCTCTAAATTTGGTGGGATGGGTGATGATGCAATGGATGACATTGATGAGAGTGATGATGAAGAGCAAGAAGTGTCAAAGCCTGTAGAACAAGATGCTGGCGAGGCATCAACAGAGAAAAAAGAGGCTGCTCCAAGCACATAA 564 0.4574 MSRHPEVKWAQRVDKVYITVQLADSKNAKVDLTPEGIFTFSGSAGAEDRQYELKLELFDKVNVEESKINVGVRSIFCVVQKAENGWWKRLLCGEGKPPHYVKVDWDKWVDEDEDDGELDLGGMDFSKFGGMGADAMGGMDFSKFGGMGDDAMDDIDESDDEEQEVSKPVEQDAGEASTEKKEAAPST 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0656 187 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 1 156 IPR045250 GO:0051879
Ssu4g0656 187 ProSiteProfiles CS domain profile. 2 91 IPR007052 -
Ssu4g0656 187 SUPERFAMILY HSP20-like chaperones 1 139 IPR008978 -
Ssu4g0656 187 CDD p23_hB-ind1_like 5 109 - -
Ssu4g0656 187 Gene3D - 2 121 IPR008978 -
Ssu4g0656 187 PANTHER BNAC05G01500D PROTEIN 1 156 - -
Ssu4g0656 187 MobiDBLite consensus disorder prediction 143 187 - -
Ssu4g0656 187 Pfam CS domain 6 81 IPR007052 -
Ssu4g0656 187 MobiDBLite consensus disorder prediction 151 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0656 Ssu-Chr4 10417985 10421225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0656 - K15730 gmx:100796372 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0656 4 10417985 10421225 Ssu4g0656 4 10417985 10421225 ECH