Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0645 ATGGATTTAGAGTTTGAATATCAAGAAGAATACAGAAGGAACTCAAGGGGAGTGCAACTTTTCACCTGCAAATGGTTGCCTTTCTCTTCTCCAAAGGCCCTGGTTTTCCTTTGCCATGGTTACGGCATGGAGTGCGGTCGCTTCATGAGAGAATGTGGAGTACGGTTAGTGTGTGCCAAATATGCTGTGTACGGTATCGATTATGAAGGGCATGGACGTTCTGAAGGTGCTTGTTGTTacataaaaaagtttgataaCATTGTTAACGACTGTTATGACTTTTTCAAGTCAGTTAGCGAGCTCCAAGAGTATAAGGGAAAGGCTAGGTTCTTGTATGGAGAGTCCATGGGAGGGGCAGTGAGCCTACTTTTACATAAAAAGGACCCTTCATTTTGGGACGGTGCAGTTCTCGTCGCGCCCATGTGCAAGATATCAGAGAAGGTGAAGCCACACCCGGTGGTCGTCAACATATTGACTAAAGTGGAAGACATAATCCCAAAGTGGAAGATAGTTCCTACAAAGGATGTCATCAATTCAGCCTTCAAAGACCCTGCTAAACGAGAAAGGATAAGGAAAAACAAGTTGATATACCAGGACAAACCCAGGTTAAAAACAGCATTGGAAATGTTGAGAATCAGCATGAGCCTTGAAGACAGCTTATATAAGGTGACCCTGCCGTTTTTCGTATTGCATGGAGAAGCAGACACAGTGACTGACCCAGAAGTAAGCAGGGCATTATATGAGCGAGCCAGTAGCAAAGATAAGACCATAAAATTGTACCCAGGAATGTGGCATGGCTTAACATCGGGGGAGACTGATGAGAACATCGATAAAGTCTTTGCAGACATTATAATGTGGCTAGACAAGCACACGAGCAATGCTGCTCATGCGTCCCCACAACAAATTGAGACTTATAACTATGGCATTGAGAGATTGGCCACAGTTGCATCACAAGCAAAGATTGTACAGCAAACAAATGGGCGTAGAAGCTATCTTTGTGGATTGAAAGGAAGCCGCTTACTATACCACTCAGCCATTTAG 1041 0.4352 MDLEFEYQEEYRRNSRGVQLFTCKWLPFSSPKALVFLCHGYGMECGRFMRECGVRLVCAKYAVYGIDYEGHGRSEGACCYIKKFDNIVNDCYDFFKSVSELQEYKGKARFLYGESMGGAVSLLLHKKDPSFWDGAVLVAPMCKISEKVKPHPVVVNILTKVEDIIPKWKIVPTKDVINSAFKDPAKRERIRKNKLIYQDKPRLKTALEMLRISMSLEDSLYKVTLPFFVLHGEADTVTDPEVSRALYERASSKDKTIKLYPGMWHGLTSGETDENIDKVFADIIMWLDKHTSNAAHASPQQIETYNYGIERLATVASQAKIVQQTNGRRSYLCGLKGSRLLYHSAI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0645 346 Pfam Serine aminopeptidase, S33 30 270 IPR022742 -
Ssu4g0645 346 SUPERFAMILY alpha/beta-Hydrolases 9 288 IPR029058 -
Ssu4g0645 346 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 304 - -
Ssu4g0645 346 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Ssu4g0645 346 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Ssu4g0645 346 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Ssu4g0645 346 PANTHER PHOSPHOLIPASE-RELATED 8 304 - -
Ssu4g0645 346 Gene3D alpha/beta hydrolase 5 300 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0645 Ssu-Chr4 10191354 10196504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0645 48 346 Acyl Lipid Metabolism Gene Families AT2G47630 64.821 2.04e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0645 K18368 - jre:108986861 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0645 4 10191354 10196504 Ssu4g0645 4 10191354 10196504 ECH