Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0616 ATGTATCTCCTCCATAAGATTACAATTGTACATGCTTTGAACAATGTAGATGCAAATGCACGATCATGCAGGCTAAAAAGTATTCCCTGTTTCAAAGATTTGTGTACTATTTATGGACATGTGATGGAAGGAAAAGGTGATACTGCACCAGAAGGGTCATCTAATTCAGGCGAAAATGGAGCAATCGAACCCTGTCTATCTAAGGATGTCTATGAGGATGCTGATGAGCTTCTTCATGATGTTAGGGCCGATGAAGACTGTGGAATCTCTACCGTTCATCCTGATGCACGACAATATATGACCCGACCTTTGCCATACTATAAAGATTTGTGTGTCATATGTGAtccaaattttgatgaaaaagaatCTTTACTGCCTCAAGATAAGCATCAAAATGCAGTTGATTTTAAGACTGAGTGTCCTTCAACATCTCAAAGTGGTCAGTCTCCAATTACACCCAATTCCAATGAAGAACAATTTAGTGGTGTCAATGAGTTAGCTCATATAGGTCAGAAACAAAGGCGTCAATCAGAGAAGTGTTCTGATTCTACCAGTCCTAAAAAATCAAGGAATGATGAACAAGGCATGGCTGTTGCTCTCCATGAGATGGCAGCTGTAGTTTCAACTGTGTCTGCAAAAAAGACTGATAACTCGATGTCAATAGAGAATGTCATAGAAGCAGTGCAAGCATTGCCTGATATGGATGATGATCTGGTTTTGGATGCTTGTGATTTCCTGGAGGATGAAAGAAAAGCCAAAACATTTCTTGCATTGGATGCCAAGCTTAGAAAGAAATGGTTGATTAGGAAACTTCGCACACAGGTGTAG 828 0.3913 MYLLHKITIVHALNNVDANARSCRLKSIPCFKDLCTIYGHVMEGKGDTAPEGSSNSGENGAIEPCLSKDVYEDADELLHDVRADEDCGISTVHPDARQYMTRPLPYYKDLCVICDPNFDEKESLLPQDKHQNAVDFKTECPSTSQSGQSPITPNSNEEQFSGVNELAHIGQKQRRQSEKCSDSTSPKKSRNDEQGMAVALHEMAAVVSTVSAKKTDNSMSIENVIEAVQALPDMDDDLVLDACDFLEDERKAKTFLALDAKLRKKWLIRKLRTQV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0616 275 PANTHER EXPRESSED PROTEIN 158 273 - -
Ssu4g0616 275 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 92 126 - -
Ssu4g0616 275 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 158 273 - -
Ssu4g0616 275 PANTHER EXPRESSED PROTEIN 92 126 - -
Ssu4g0616 275 MobiDBLite consensus disorder prediction 171 189 - -
Ssu4g0616 275 MobiDBLite consensus disorder prediction 136 162 - -
Ssu4g0616 275 MobiDBLite consensus disorder prediction 136 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0616 Ssu-Chr4 9794299 9797651 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0616 - - gmx:100787716 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0616 4 9794299 9797651 Ssu4g0616 4 9794299 9797651 ECH