Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0615 ATGGAAGACGAGACTTTGAGTTTTGGCCTCTCCACTGCATCCAGAAGCTACCAATCGAGGCTCAAGTCACACCTCGAGCTCTTCATCGATTTTGATGACGTCAATGGGGATGAGGAGTTGAGGACGGCTTATCCATGCCCATTTTGCGCAGAGGATTTTGATCTTCTTGAGCTATGTTGCCATCTTGACTTCGACCATCCAATAGAAGCCAAGTCTGGGATTTGTCCTGTTTGTACCATGTGGGTTGGGACAAATATGGTTGATCATATAGCAGCACAACATGGAAACTTGTTTAAGAGTCAGCTCAAATCAAAATGCTACAAAGATGAATCCTACCCAGCTCTTTCCTTTTCAAGAAAGGGTGAACAGGACGGACACTGGCGATCTTTTTCTGCTGGGTTATCTCCTGCAATGTCTACCTCCAAGGCAGCAAGTGATCCATGGCTGTCATTTTTATGCGGTGCATCTCCTGTTGATGAACCTGAATGTGTGCAGCCAGATTCTTCAAGTGAAGTAAGCATTGAAGAAATACACTCAAATGATAAGGTGTTAGAAAGAGATGTTCAGCCGCCTTTATCTGACAAAGACCAAATAGAGAAAGCACGGCGCAGTGAATTTGTACAGGGATTTTTGGTGTCTACTATCCTTGATCCTGACTTCTGA 663 0.4434 MEDETLSFGLSTASRSYQSRLKSHLELFIDFDDVNGDEELRTAYPCPFCAEDFDLLELCCHLDFDHPIEAKSGICPVCTMWVGTNMVDHIAAQHGNLFKSQLKSKCYKDESYPALSFSRKGEQDGHWRSFSAGLSPAMSTSKAASDPWLSFLCGASPVDEPECVQPDSSSEVSIEEIHSNDKVLERDVQPPLSDKDQIEKARRSEFVQGFLVSTILDPDF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0615 220 PANTHER DROUGHT-INDUCED PROTEIN 1 220 - -
Ssu4g0615 220 Pfam Stress-induced protein Di19, C-terminal 115 215 IPR027935 -
Ssu4g0615 220 Pfam Drought induced 19 protein (Di19), zinc-binding 43 95 IPR008598 -
Ssu4g0615 220 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 220 IPR033347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0615 Ssu-Chr4 9788109 9792310 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0615 - - gmx:100527153 394.045