Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0605 ATGAGTGATGATGACATCTTTTCCTCAAAAAAATCATTCCATTGGGATTTGAGGACCACGTCAAATCTGGTGGACACCGGAAATGACGTCATTCCGAGCGCAAAGTCCACATTTCAAAGATCAGAACATTGCACATTCCTGGCCATAGCACAAGTTTCCGCGCTTCATACATTATATCCTCTTCCTAAAATACCCCTTCAACTCAAGTCGTTCTCGAAACTTCCAAACCCTAACCtcacttcaaaaataaaaggcaCTACGCTCTCTCTTCCCGTCCGCGGCAGTACAATGGAGAGTTACGGGTCGGGTCAGCGTCCGTACGGCGGCGAGCGGAGGATGGAGGTTGTGAGCGGTAAAAGCCACGGTTGGAGTGGGACTCGGTCGCCGGACTCAGCTCAGGGGAGTGAAAAGCCGCGGAGATTCAGCGATCCAGAAgcgaagaggaagaaaaggatAGCGAAGTACAAGGTTTACGGCGTCGAAGGGAAGGTTAAGGCTACGCTCCGGAAAGGCCTTCGATGGATTAAGAAAAAGTGCTCTCAGATCGCCCATGGCtactag 561 0.4706 MSDDDIFSSKKSFHWDLRTTSNLVDTGNDVIPSAKSTFQRSEHCTFLAIAQVSALHTLYPLPKIPLQLKSFSKLPNPNLTSKIKGTTLSLPVRGSTMESYGSGQRPYGGERRMEVVSGKSHGWSGTRSPDSAQGSEKPRRFSDPEAKRKKRIAKYKVYGVEGKVKATLRKGLRWIKKKCSQIAHGY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0605 186 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 97 186 - -
Ssu4g0605 186 Pfam Domain of unknown function (DUF3511) 141 185 IPR021899 -
Ssu4g0605 186 MobiDBLite consensus disorder prediction 94 149 - -
Ssu4g0605 186 MobiDBLite consensus disorder prediction 133 149 - -
Ssu4g0605 186 PANTHER DUF3511 DOMAIN PROTEIN 97 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0605 Ssu-Chr4 9690846 9691610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0605 - - gmx:100807345 164.466