Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0578 atgatGCGACTTCACAAACTATACCATCGCCTCACTATTCTCCCCTTCTCGCCGTTATCGCTCCCTTCTTCTAATCCCTCTCTTCTCCCTCTCGCTCCTCTACTGCGCCTCCCGCTCCGTCACGGAACCGCTGCGAACTTCGCTTCCATGGCTACCTCGCGGTTGCGCAATTTAGCACCTCTCACTGCTGCGCCTGCTGAAGACGCCGCTGGCTCCGTTTCTTCCTGTGCCAACGCCGCTACTTCCGTTGATCACGAAGATGAGTCAAATATAGGAGTAAGGTATCGCGTTCCCCCACCTGAGATCAGGGATATTGTTGATGCTCCACCTGTACCGGCATTGTCATTTTCACCACTTAgggacaaaattatttttctcaagcGAAGAGCTTTACCTCCTCTGGCAGAAATAGCAAGGCCGGAGGAAAAGCTGGCTGGTATACGTATTGATGGAAAGTGCAATACTAGGAGTCGTATGTCATTCTACACTGGTATAGGGATTCATCAAATTCTTTCTGATGGTACATTAGGGCCAGAGATTGAGGTGCATGGTTTCCCTGATGgtgctaaaataaattttgtttcttggtCTCCTGATGGTTGGCATTTGTCCTTTAGCATTTGTGTGAATGAGGAGGACAGTGATAGCAGTAAACTCACAGTATGGATTGCAGATGTGAAAACGGGGAAAGCTAGACCATTGTTTCAGTCACCTAATGTACATTTGAATGCAGTTTTTGACAATTATGTTTGGGTAAATAACACTTCATTGTTAGTTTGCACCATTCCATCACCTCGTGGAGCTCCGCCAAAAAAACCTTTGGTTCCCGGTGGCCCAAAAATTCAATCTAATGAAGAGAAAAACATTATTCAAGTGAGAACATTCCAGGATTTGCTGAAGGATGAATATGATGAAGATTTGTTTGACTACTATGCCACCTCACAGCTTGTTTTAGCTTCTTTGGATGGTAGTAAAAAGGAAATTGGCCCACCAGCTGTTTATACCTCTATGGACCCTTCCCCAGATCAGAAGTACATTTTGATTAGTTCAATTCACAGGCCATACTCTTTCATCGTACCTTGTGGAAGATTTCCAAAGAAGGTAGAGTTATGGAATGCTGATGGAAAATTAATCAGAGAGCTTTGTGACTTGCCCCTTGCTGAAGACATTCCAATTGCATTCAATAGTGTGCGAAAAGGGATGCGCTCCATTAATTGGAGAGCTGATAGGCCGTCAACTCTTTACTGGGTAGAAACTCAAGATGGAGGTGATGCAAAGGTGGAAATTTCTCCTCgtgatataatttatacacagcCTGCTGAACCACTAGAAGGTCAACAGCCAACAATATTACATAAGCTTGATCTCCGTTATGGAGGGATTTCTTGGTGTGATGATTCTCTGGCTTTGGTATATGAATCTTGGTACAAAGCACGGAAAATAAGAACATGGGTAGTCTCTCCTGGATCTGAAGATGTAGCTCCGCACATTCTATTTGATAGATCTTCAGAAGATGTGTACTCTGATCCTGGCACTCCTATGATGCGGAGAACTGAAGCTGGGACATATATTATTGCCCGGATAAAGAAGGAAAGTGATGAAGGAAGATATATTATACTGAATGGAATTGGTGCTGGACCAGAAGGAAACATTCCATTCCTTGATCTGTTTGACATAAATACAGGTAATAAGGAACGAATCTGGGAGAGTGATAAGGACAAGTATTACGAGACTGTTGTTGCTCTAATGTCTGATCAGGAAGGAGGGGATTTGCATTTAGACAAGCTGAAGATACTGACTTCAAAAGAGTCAAAAACTGAAAATACCCAATATTACTTTGTTAGTTGGccagataaaaaaatagttcaggTTACAAATTTCCCTCATCCATACCCTCAGCTTGCATCGTTGCAGAAAGAGATGATTAGGTACCAAAGAAAAGATGGGGTTCAACTTACTGCTACATTATACCTGCCACCAGATTACAGTCCATCAACAGATGGCCCTTTGCCATGTCTGGTTTGGTCTTACCCAGGAGAATTTAAGAGCAAAGATGCTGCTGGACAAGTTCGTGGTTCTCCAAATGAATTTGCTGGGATAGGCTCCACATCGGCCCTTCTTTGGCTAGCTAGAAGGTTTGCAATTCTATCTGGGCCTACCATTCCAATTATTGGTGAGGGTGATGAAGAGGCAAATGATAGGTATGTAGAACAATTAGTTGCAAGTGCAGAGGCTGCTGTGGAGGAAGTTATCCGGCGTGGGGTAGCTGATCCAAAGAAAATAGCTGTTGGTGGACATTCCTATGGTGCGTTCATGACTGCTAATCTCCTGGCACACGCACCTCATCTTTTCTGTTGTGGAATTGCTCGTTCTGGTGCTTACAACAGAACACTCACTCCTTTTGGTTTTCAGAATGAAGACAGAACTCTTTGGGAGGCCGCTAATACTTATGTAGAGATGAGTCCTTTTATGTCGgctaataaaattaagaagccCATCTTGCTTATCCATGGGGAAGAGGACAATAATCCAGGAACATTAACCATGCAGTCAGACAGGTTTTTCAACGCTCTGAAGGGTCATGGCGCTCTTTGTCGGCTGGTGATTCTGCCTCATGAGAGTCATGGTTACACTGCCAGAGAAAGCATCATGCATGTCCTTTGGGAAACAGATAGATGGCTACACAAATACTGCGTGTCAAACAGTTCTGATGCAGGAGAAGGCCATGCTACTGGCACAGTCAAAGAACATGATAGCAAAGGAACCCCAAATGCTGAAAGCAAAGTGGTTGCAACTAGCGGAGGTGGCAGCAGAGAGGTGTATGATTTTGAGTACGAAGAATTTCATTCTCTGCCGAGATCATCCTTGTGTAAATCCCTGTATAGCTTGGACGTATTCTTGCTACCTTGTGAAGAGTAG 2919 0.4258 MMRLHKLYHRLTILPFSPLSLPSSNPSLLPLAPLLRLPLRHGTAANFASMATSRLRNLAPLTAAPAEDAAGSVSSCANAATSVDHEDESNIGVRYRVPPPEIRDIVDAPPVPALSFSPLRDKIIFLKRRALPPLAEIARPEEKLAGIRIDGKCNTRSRMSFYTGIGIHQILSDGTLGPEIEVHGFPDGAKINFVSWSPDGWHLSFSICVNEEDSDSSKLTVWIADVKTGKARPLFQSPNVHLNAVFDNYVWVNNTSLLVCTIPSPRGAPPKKPLVPGGPKIQSNEEKNIIQVRTFQDLLKDEYDEDLFDYYATSQLVLASLDGSKKEIGPPAVYTSMDPSPDQKYILISSIHRPYSFIVPCGRFPKKVELWNADGKLIRELCDLPLAEDIPIAFNSVRKGMRSINWRADRPSTLYWVETQDGGDAKVEISPRDIIYTQPAEPLEGQQPTILHKLDLRYGGISWCDDSLALVYESWYKARKIRTWVVSPGSEDVAPHILFDRSSEDVYSDPGTPMMRRTEAGTYIIARIKKESDEGRYIILNGIGAGPEGNIPFLDLFDINTGNKERIWESDKDKYYETVVALMSDQEGGDLHLDKLKILTSKESKTENTQYYFVSWPDKKIVQVTNFPHPYPQLASLQKEMIRYQRKDGVQLTATLYLPPDYSPSTDGPLPCLVWSYPGEFKSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAILSGPTIPIIGEGDEEANDRYVEQLVASAEAAVEEVIRRGVADPKKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEAANTYVEMSPFMSANKIKKPILLIHGEEDNNPGTLTMQSDRFFNALKGHGALCRLVILPHESHGYTARESIMHVLWETDRWLHKYCVSNSSDAGEGHATGTVKEHDSKGTPNAESKVVATSGGGSREVYDFEYEEFHSLPRSSLCKSLYSLDVFLLPCEE 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0578 972 PANTHER GLUTAMYL ENDOPEPTIDASE, CHLOROPLASTIC-RELATED 43 929 - -
Ssu4g0578 972 Pfam Prolyl oligopeptidase family 744 897 IPR001375 GO:0006508|GO:0008236
Ssu4g0578 972 SUPERFAMILY DPP6 N-terminal domain-like 187 584 - -
Ssu4g0578 972 SUPERFAMILY alpha/beta-Hydrolases 639 897 IPR029058 -
Ssu4g0578 972 MobiDBLite consensus disorder prediction 904 933 - -
Ssu4g0578 972 Gene3D alpha/beta hydrolase 631 898 IPR029058 -
Ssu4g0578 972 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 43 929 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0578 - - aprc:113863823 1739.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0578 4 9246956 9252798 Ssu4g0578 4 9246956 9252798 ECH