Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0576 ATGGAGAGGCAGAGAAGTTTCTCCTTCAAACCCACTAGGCTTTTGGTCTTCTCATTCACAATCTTTTCCTCCATCCTCTTCCTTTCCACCTTCGCCATCTGGCTCACCAATTCCACACCTTCAATTCACCAACAGACTCATCTTAAGTTCAACACTTCTTCTTCTGTCGGTGACAGTTTCAGAGTGGCTCTTCCACCTTTAGCTGTTCAATCCTTGACTAGTTTCACCAAAAACTTCACTGTAGGTGGTGTGAAAATTCCAACTTTGATCGATAACCGTCTTGCAAGGACCCAGAACAGCCTCTCTGGATCCAAATCTGAACCTGTACGACACCATGGTGGTGCTTCAAATGTTAATTTCACGGCAATGCAAGAGCATGGAACTTCACCTGAGAGGGGACCCAGTAGCGAACGGAAGAAAATAGTAGCAGGTGGTTTAGTTGGGAAAACTCAAGTTCCTATTTTGAAGAGGATTGAGCAGAAGAGAGTTAAAGGGTGTGATTTAACACAAGGGTATTGGGTTTTTGATGAAAGCTATCCGCTTTATTCCAAAGATTCGTGTCCTTTTATAGATGAAGGCTTTGATTGTGAAGGAAATGGAAGATTGGATAGAAACTACTCTAAGTGGAGATGGCAACCCAAAGGCTGTGACCTTCCAAGGTTCAATGCAACAAAAATGCTGGAGTTGATAAGAGGGAAAAGGCTTGTTTTTGTGGGGGATTCAATTAATAGGAACCAATGGGAATCAATGCTGTGCATGTTAGTGGGTGCTATTAAAGATCCAAAGAGAGTGTATGAGACCCATGGAAGGAAAATTACCAAAGAGAAGGGAAATTATAGTTTCAGGTTTCTGGATTATCAATGTACAGTTGAATACTATGTCAGCCATTACTTAGTTCACGAAAGCAAGGCTAGAATAGGGCAGAAACGAAGACCAACCTTGCGAATTGATGCTATTGATCACGGTACTTCGAGTTGGAGGGGAGCTGATATATTGGTTTTCAACACTGCACATTGGTGGTCACATTACAAAACAAAAGCTGGGATTTATTACTACCAAGAAGGGAGTCTAGTTCATCCCCAGCTAAATGTTTCTACAGCTTTCAGGAAAGCTTTAAAGACTTGGGCTTCATGGGTGGACAAACGCATTGACCGTAGAAAAACCCGAACCCGAGTTTTCTTTCGAAGTTCAGCACCATCACATTTCAGGGGTGGTGATTGGAATTCGGGAGGACATTGTACAGAAGCCACTCTTCCTCTTAAAGAAACCTTGAGCACTACATACCCTGAGAAGAATATAATCGTGGAAGAGATAATAAAGCAGATGAAAACTCCTGTGACATTGTTGAATATAACTAGTTTGTCAGAATATAGGATAGATGGTCACCCATCAATTTATGGGAGAAAAACACGGTCCTCTAGAGTTCAAGATTGTAGCCATTGGTGCCTTCCAGGGGTTCCAGATACATGGAAtgaactattatattttcatttacaaaGTAGATGA 1506 0.4143 MERQRSFSFKPTRLLVFSFTIFSSILFLSTFAIWLTNSTPSIHQQTHLKFNTSSSVGDSFRVALPPLAVQSLTSFTKNFTVGGVKIPTLIDNRLARTQNSLSGSKSEPVRHHGGASNVNFTAMQEHGTSPERGPSSERKKIVAGGLVGKTQVPILKRIEQKRVKGCDLTQGYWVFDESYPLYSKDSCPFIDEGFDCEGNGRLDRNYSKWRWQPKGCDLPRFNATKMLELIRGKRLVFVGDSINRNQWESMLCMLVGAIKDPKRVYETHGRKITKEKGNYSFRFLDYQCTVEYYVSHYLVHESKARIGQKRRPTLRIDAIDHGTSSWRGADILVFNTAHWWSHYKTKAGIYYYQEGSLVHPQLNVSTAFRKALKTWASWVDKRIDRRKTRTRVFFRSSAPSHFRGGDWNSGGHCTEATLPLKETLSTTYPEKNIIVEEIIKQMKTPVTLLNITSLSEYRIDGHPSIYGRKTRSSRVQDCSHWCLPGVPDTWNELLYFHLQSR 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0576 501 MobiDBLite consensus disorder prediction 100 119 - -
Ssu4g0576 501 Pfam PMR5 N terminal Domain 165 217 IPR025846 -
Ssu4g0576 501 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 116 500 IPR029962 GO:0016413
Ssu4g0576 501 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 218 495 IPR026057 GO:0016740
Ssu4g0576 501 PANTHER - 116 500 IPR029965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0576 Ssu-Chr4 9224846 9227403 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0576 - - gmx:100819457 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0576 4 9224846 9227403 Ssu4g0576 4 9224846 9227403 ECH