Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0573 ATGGCTGATTCCTCTTACCCGTCAAATTTGGAGCCAAACGGCTCGAGCTCAATCCAAATTCCAAAGATACCACCCTTCGTACCAAACCAACGCGCAAAcgatataaaaaagaagaacgACACACACACAGACGCTCATGGTTGCTATGGGTTTGCAATTGCAGCAAAAAGCCAAAGACCTCTTCAAGTACTCAACCCCAAAGAGATCTTCTACCTCTTCACCTTCACCCTCCTCACCCTCCTCACCCTCCTCTTACCCCTCTCGTTTCTTCTCCTAGCGAAATTCTCCGATGCCCAGTACTATCTTCAAACCCTCGCTTGGTACCATTCACCACAGCACTTTCCCTATGCTTTAACACTTGCCCTTCACATCAACCCACTCGTTCTTTATGTTCTCGTGTCCATTGTTAGCATCGCTTCCTTGATCCAAGGCTTGACGGGGAAAATCACCATTTTGAGTGACTCATCGTCGTCATCGAGCAGCGCTCTTCAACCTCGTCTCTACACTGCGTGGATTCTCCTTTGCACGTTCCAAGCTTGCGTTGGTTTGGGCATCGAGGGAAGCATTGAGGCGGGGCTCTACGACTCTGACTCGAGTTTTGGCGTGGAGAGGAGCTTGTTGAGCAGAGTGGTTTTCCTATTGGGCTTGCACGAAACCACGCAGGTTTGGGCCAGAATGGTGGTGAGGCCCGTGGTGGATGACACGGTGTTCCGCGTTGCGAGAAAAGAAAGATGGGTCGAGAGGGTGGCTATGGCTGCGAGCTTAGGCaccttgtggtggtggaggttgagGGAGGATGTGGAGAGTTTGATGGTTATGGTTGAGGCAAAGAAAGAGCAATTGATGGATGTGAGAGTAAGTGACTTTGTTGGGTGGTGGCTCTATTATCTTACCGTCACAATTGGGGTGGTAAGGGTTGTAAAGGGTCTTATGTGGATGGCCACTATTTGTCTCTGTGGAAGAAGGACAACATGGGTGGAACATACCGAGAATGATGATAAGgtgtaa 1008 0.4742 MADSSYPSNLEPNGSSSIQIPKIPPFVPNQRANDIKKKNDTHTDAHGCYGFAIAAKSQRPLQVLNPKEIFYLFTFTLLTLLTLLLPLSFLLLAKFSDAQYYLQTLAWYHSPQHFPYALTLALHINPLVLYVLVSIVSIASLIQGLTGKITILSDSSSSSSSALQPRLYTAWILLCTFQACVGLGIEGSIEAGLYDSDSSFGVERSLLSRVVFLLGLHETTQVWARMVVRPVVDDTVFRVARKERWVERVAMAASLGTLWWWRLREDVESLMVMVEAKKEQLMDVRVSDFVGWWLYYLTVTIGVVRVVKGLMWMATICLCGRRTTWVEHTENDDKV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0573 335 PANTHER TRANSMEMBRANE PROTEIN 61 335 - -
Ssu4g0573 335 MobiDBLite consensus disorder prediction 1 23 - -
Ssu4g0573 335 PANTHER TRANSMEMBRANE PROTEIN 61 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0573 Ssu-Chr4 9151054 9152321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0573 - - gmx:100820518 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0573 4 9151054 9152321 Ssu4g0573 4 9151054 9152321 ECH
Ssu4g0573 4 9151054 9152321 Ssu7g1936 7 38728239 38729069 PCT