Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0569 ATGGGTTTCAACAAAAACCTTCTCCTCATCGTGTCCCTCTCTTCTCTCCTCCTATCCACCCGCGCCACACCTCACATCATTGCCTCCTCTCCTCCCCCAGTTCTCTCCCCAAACCACAACACAGACCCCATCTTCACGAAAGCACTCAAAGCCACCCAACAGGTCGTGGAATTCTGCAGCGGCACTGAGAACGCAACCCTCTGCGCCGAAACCATTGCCCCGCATTTCCAAAGCTCGTTCGACCCCATCAAGGCCCTCGAGACGGAAATCGAGGCCACGCGGAACCAAAGCATGAAGGTCGCTGGCATCATCGCCAAGTCACTCGGCGACCCCAGCACCGACAAAAAGGCGCGTGACGCACTCGACATTTGCAAGTCGCAATACAAAAGCATTGTGGATGCCACCAAGGAAGCCGTGGAGTTGCTGAACCTACACAACGTGGTCGATGCTTACTACGAGTTCAGCTCCGTGATTTCGGACCATTCCGCTTGTGAAGACGCGTTTAAGGAATCTCCTGGAGTTAGCATTCCCTTCGCTGATGACTCTTTCACCGTCTTTCAGCTTGGTGGCAATTGCTTGTTCATCATGGATGGGATGGTTAATAGTAGTAATAAGTACTTCTTGGTTTAA 630 0.5238 MGFNKNLLLIVSLSSLLLSTRATPHIIASSPPPVLSPNHNTDPIFTKALKATQQVVEFCSGTENATLCAETIAPHFQSSFDPIKALETEIEATRNQSMKVAGIIAKSLGDPSTDKKARDALDICKSQYKSIVDATKEAVELLNLHNVVDAYYEFSSVISDHSACEDAFKESPGVSIPFADDSFTVFQLGGNCLFIMDGMVNSSNKYFLV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0569 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 199 IPR035513 -
Ssu4g0569 209 PANTHER PECTINESTERASE 1 203 - -
Ssu4g0569 209 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 203 - -
Ssu4g0569 209 SMART PMEI_2 50 195 IPR006501 GO:0004857
Ssu4g0569 209 CDD PMEI-like_2 54 196 - -
Ssu4g0569 209 Pfam Plant invertase/pectin methylesterase inhibitor 55 193 IPR006501 GO:0004857
Ssu4g0569 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 198 IPR035513 -
Ssu4g0569 209 TIGRFAM PME_inhib: pectinesterase inhibitor domain 48 198 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0569 Ssu-Chr4 9094288 9094917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0569 - - gmx:102660506 235.343