Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0540 ATGGCATTGGAGATAGCATGGTATGATTTTGTGTGTTTTGGCATAGTTGGCATGGCCTTTGTAGGTGCCTTGTGGGTGCTGGGAACGCACGAAGGAGCTTCCAGAAGAGACTTTGAGACCACCTATGAGAGCCTTTTGTTGTCTCGACCTGACGATGAAGTGGTCGTGAATGTGCTGCCCAGGGGTCACGTTAGCGCCTTACAGCTGTGGACAAGTTGTTGGCGAGGACTGCATCCCTTTTGCCTCCTCGCTACTCGTTTCCTTTCCTTTGTTATTATGCTCGTTTTCTTAGTCTGGGATGTTGTCGTATACGACGCAAGCATCTTTGTTTACTACACAGAGTGGACTTTCACATTGGTTACCATATATTTTGCGCTGGGGACTATTGTATCTGCATATGGATGCTGGCAGTTCTTTAATAAACCTCTGATTCACAATGGAGCAAGGGCTGAGTTTCTGAGAAGGGATGTAGAAGAGACAATGTCTACAAACCTAATCGCCTATCAAGAGAAAGAAGCCAAGGGTTCTATCAAGTTGGAAAGCCGATATGTTGAAGAGGAGTTTCAACAAAGAGCACGGTTTTGGGGTTACCTCATGCAAACTACATATCAGACATGTGCAGGGGCTGTCATCCTAACAGACGTTGTATTTTGGGGTGTTATAGTCCCATTCTTATCCATATCTCATTTAAGGCTAAACCCGTTGATGGGTTGCATGCATTCATTGAATGCATTTTTCCTCCTTTTGGAAACAGCTCTTAATAATCTCCCGTTTCCTTGGTTTAGAAtctcttattttgttctctgGAGCTGTGGTTACGTCATTTTTCAATGGATCATCCACGCCTTCGGTCTTAAATGGTGGCCATATCCCTTTCTCGAGCTTAATTACAAGTGGGCTCCTGTCTGGTATTTGTGCCTGGCGGTAATTCATGTCCCTTGCTATGGCTTGTATTCCCTGATAGTGCGAGCCAAAATTACGATTCTCCCAAGATTTTTCCCTCAAGCATTTTTGAGGCCATACTAG 1026 0.4396 MALEIAWYDFVCFGIVGMAFVGALWVLGTHEGASRRDFETTYESLLLSRPDDEVVVNVLPRGHVSALQLWTSCWRGLHPFCLLATRFLSFVIMLVFLVWDVVVYDASIFVYYTEWTFTLVTIYFALGTIVSAYGCWQFFNKPLIHNGARAEFLRRDVEETMSTNLIAYQEKEAKGSIKLESRYVEEEFQQRARFWGYLMQTTYQTCAGAVILTDVVFWGVIVPFLSISHLRLNPLMGCMHSLNAFFLLLETALNNLPFPWFRISYFVLWSCGYVIFQWIIHAFGLKWWPYPFLELNYKWAPVWYLCLAVIHVPCYGLYSLIVRAKITILPRFFPQAFLRPY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0540 341 PANTHER UNCHARACTERIZED 1 339 - -
Ssu4g0540 341 PANTHER PROTEIN ROLLING PROTEIN 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0540 Ssu-Chr4 8468635 8471981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0540 - - gmx:100779894 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0540 4 8468635 8471981 Ssu4g0540 4 8468635 8471981 ECH
Ssu4g0540 4 8468635 8471981 Ssu7g1905 7 38146096 38150440 PCT