Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0534 ATGTCTAAAGATTTTCACATGTTGGATTGCATCGAGTTTTGCAGGTTAGATATGGTAGTCACTACGATAATAATGACCAAGCAGCATCTTCTGACTTACATCTACCTTCTAGTTTACATTTCACTTTCATCAGGGGTTATTCTGTACAACAAGTGGGTCCTCTCtacattgtattttaattttccattcCCAATAACACTCACTATGATCCATATGGCTTTTTCTGGTGCGGTGGCCTTTTTTCTTATCCGTGTTTTGAAGGTTGTATCACCGATTAAAATGACATTTCATATATATGCAACTTGTGTGGTCCCTATAAGTGCCTTCTTTGCAGCTAGTCTGTGGTTTGGGAATACTGCTTATTTGTACATTTCTGTGGCCTTCATCCAGATGCTTAAAGCCCTGAtGCCAGTGGCAACATTTCTTGTAGCTGTTACTTGTGGAACCGAGAAATTAAGGTGTGATGTGTTCTGGAACATGGTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCCTATGGggaaattcattttaatgtgcTCGGTACAGTTTATCAGGTCACAGGAATAATTGCTGAAGCATTGAGGCTGGTTTTAACACAAGTTCTTCTTCAAAAGAAGGGCTTGACACTAAACCCTATTACCAGCTTGTATTACATAGCACCCTGCAGctttgtatttctttttgtcCCATGGTATATCCTTGAGAAGCCTGAGATGGAAGATCCACATATGCAGTTTAACTTCTGGATATTTTTCTCAAATGCTCTTTGTGCTTTGGCGTTGAATGTTTCCACATTCTTAGTGATTGGTAGAACTGGGGCAGTAACTATTCGGGTGGCGGGAGTTTTGAAAGACTGGATACTTATCACACTTTCAACTGTCTTATTTCCTGAATCAAAGATTACTGGGCTTAATATTATTGGCTACGCTATAGCTTTAAGTGGTGTTGTTTTTTACAACTACCTTAAGGTCAAGGATGTTCGAACATCTCAACTTCAAAGCATCCAAGATGAATCAGCAAAGGAGCTGCAGACGGAGAAAAAAGCAGATGATGACATGGACAACAAAGAGGAGACTTTATGGAATGATTCAGTTTCTGATACTCATTTAGATGAAGAAGCACCTTTAATCTCTTCGTCGTGGATATCTCATCTTGGAAGAAAGCCAGCTTAG 1173 0.3819 MSKDFHMLDCIEFCRLDMVVTTIIMTKQHLLTYIYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFFLIRVLKVVSPIKMTFHIYATCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFLVAVTCGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVLGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYILEKPEMEDPHMQFNFWIFFSNALCALALNVSTFLVIGRTGAVTIRVAGVLKDWILITLSTVLFPESKITGLNIIGYAIALSGVVFYNYLKVKDVRTSQLQSIQDESAKELQTEKKADDDMDNKEETLWNDSVSDTHLDEEAPLISSSWISHLGRKPA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0534 390 PANTHER SOLUTE CARRIER FAMILY 35 10 370 - -
Ssu4g0534 390 Pfam Triose-phosphate Transporter family 34 320 IPR004853 -
Ssu4g0534 390 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 10 370 - -
Ssu4g0534 390 MobiDBLite consensus disorder prediction 341 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0534 Ssu-Chr4 8380568 8384546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0534 24 387 Organic Solute Cotransporters AT3G17430 76.230 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0534 - - gmx:100779373 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0534 4 8380568 8384546 Ssu4g0534 4 8380568 8384546 ECH