Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0520 ATGTCAGGGACTGGACTTTCAGTTGCCTTTCCCCACAAAGGTAAATTTGTGGATGAGAATCATGACTGTTATGAGGGGGAGAAAGTAAGCACAACAAATGTTGAGGAGGAAAATGCAACTGCAGTAATAGCTACTGCTACAAATGTTGTTACAAATGTTGATGAGGGAAATGGTAATGTTGGAACAACAACTGTTGCAAATGCTGTGGCTGATGTTGAAAATGTTGATGCTCCACAGACCTGCCAAGGTCGCACTCGCCTGACGGCTCGTATAGGACTCCTGGTGGGTGATGCCCATGACTACCCCGCTCGACGGTTTCAGTTCCATTTAGCAAAACTTGAAGCCATGGATGAAAATTCGGATCGTCCTATCAGGGTTATGAACTTCGTCTCCGAAGAGCAATTGGTAGAAGCAAAAAGAGCAAGGGGTGAACGAGTTGACGACGGCACTGCCCAGAGGGATAGACCTCTCTACGAGATTTTAAAGGAGAATAAGGACAAACGGGATGCGGAATTTAATGAAAGGTTCAAGCACAGGCCACCTAAAGCTTTAGACGAAGATGAGACCGAGTTTCTTGATAATTATGAAGCATCAAGAAGGGAATATGAACAACAAGTGGCAGATGAGGAAGCCCAACAAATCCAAAGCTTTCAAGCAGCGGTGGCAGCACAGTCCAACATCGTGCACGAAGTTAAGGAAAAAACCCCTTTACCTGTCGTCCAGGAACAGAAGTCTGCTGGAAAGAAGAATCCAGCCTCTCGTCCATTAGGCATGATTATAAAAGTCAAGCCCCAAGCTAAAAAAGCCAAGGTGGATGAAGGAAATGCTGAGGAAATTTCAAAAGTAGGAAATACTCCTGCGAATGATAAGACTAAGTCTTTAGAACCAGTACCGTCATTGAATGGCGAAGCTGATAAGCCCCGTGAAGTTGCCCTAACTGGCCTTGTTTCATACAGTGACGAAAGTGATGATGATGACTTGTAA 984 0.4482 MSGTGLSVAFPHKGKFVDENHDCYEGEKVSTTNVEEENATAVIATATNVVTNVDEGNGNVGTTTVANAVADVENVDAPQTCQGRTRLTARIGLLVGDAHDYPARRFQFHLAKLEAMDENSDRPIRVMNFVSEEQLVEAKRARGERVDDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDNYEASRREYEQQVADEEAQQIQSFQAAVAAQSNIVHEVKEKTPLPVVQEQKSAGKKNPASRPLGMIIKVKPQAKKAKVDEGNAEEISKVGNTPANDKTKSLEPVPSLNGEADKPREVALTGLVSYSDESDDDDL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0520 327 MobiDBLite consensus disorder prediction 281 295 - -
Ssu4g0520 327 Pfam FAM192A/Fyv6, N-terminal domain 136 217 IPR019331 -
Ssu4g0520 327 PANTHER BNAC06G18360D PROTEIN 116 282 - -
Ssu4g0520 327 Coils Coil 192 212 - -
Ssu4g0520 327 MobiDBLite consensus disorder prediction 264 327 - -
Ssu4g0520 327 PANTHER NEFA-INTERACTING NUCLEAR PROTEIN NIP30 116 282 IPR039845 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0520 - - gmx:100780978 370.548