Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0511 ATGGGTTCAGTTCCGAATGTGAATGCTGCGAGGGTTAGGGATTTCATAGCAAAGGAAGTTGCTGATTGGAACGACGAAGTGATTGCCGTTGCTCGATTCAAAGCCTTTTCCGGTCAAAGATGCGATTGGGAACCCACTTTCCTCTTCTGGAAACGTTTGATCATCAAAATCGCCACCCATTTTCGCTTCCTCCTCATTCGACCCTCCCAGGTTAAGAATGATTGGTTTGATCGAGGAGGGTTAACCCCTTTGTGTCTCGACAATGTACTGtcTCTAATGTATAATGAAGGTGACATCACGAGAACTGTGGATCTTGCGGATCCAACGAGTGGGCGATTCTCCCTACTAGTCAGAAGAGTGAGTAACTTAATAACAAGACAAGCAACTCCAGATATGATGGCTGAAGAATGTGTTATTGTAACGGCTATGCTTAAGGATAAGGCTGCTGAGGTTGTCAAACATCTATCTGAAAGTCACTGGAATTCATCTTGTATCGTCACAATGAAGAAGTTTCAGGAAATATGTGGAGGGCAGGATGAAGCATCTGTAATATTGAGGTATCTGTCTGGGTGTAGAGCAGCACAGTATCTGTCAGTGAATAAGAAAGAATTTGTAGAGggGGTAAAAGTTTCTCTCTCAGCAGGAGCATTATCTAGTATCTCTAATCTAGATTATGATGTTCTGCACTTGATTTGGACAACTGAGAAGCTTCAGCAACAACTGGATGTGACTGACAGGCGTTACGGATTGTTGAGAAAATCAGCATTGGCTTCTCTACATTCTGGGAACAAAAAATTGGCCCTCAACTATGCAAGGGAGCTGAAGTTAGTCACCCAGAGTAGAGAAAAATGTTCATCACTTTTGAGCAGAGTAGAAGAAGTACTTGGCATTATTGCTGATGCTGAGTCAACGAAAAAGGTTGCTGAAGCTATGCAGATTGGAGCCCGGgctattaaagaaaataaaatcagcGTGGAAGATGTTGATCTTTGTTTAAGAGATATCCAAGAGAGCATTGATTCACACAAGGAAGTTGAAAAGATGCTAGAACAAACACCATCATATGTGGATATCGAGGATGAAGATATTGAAGAAGAATTCAAGAAATTGGAGCTGGCTGTTGGGAAGGAGGCTCAAGTTCCTGCATTGGAGAAGACGATTGGTGCAGAAGAAAGAACAGCTGTGGAAGCAGCTGAATTTATTAGTGATGCTTTCTCAAATCTCAAGCTTTCAGACCATCCAGCTGGGAAGCCAGGAGTCACTCAGGCGGTGTCAGAGGGAGACAAAATAACGAAACAATTAGAAATGGAAGCTGTGTGTACAGTTAATGTTGCGGATAAATCTCCAatcatttgtatttttaaagactaa 1371 0.4121 MGSVPNVNAARVRDFIAKEVADWNDEVIAVARFKAFSGQRCDWEPTFLFWKRLIIKIATHFRFLLIRPSQVKNDWFDRGGLTPLCLDNVLSLMYNEGDITRTVDLADPTSGRFSLLVRRVSNLITRQATPDMMAEECVIVTAMLKDKAAEVVKHLSESHWNSSCIVTMKKFQEICGGQDEASVILRYLSGCRAAQYLSVNKKEFVEGVKVSLSAGALSSISNLDYDVLHLIWTTEKLQQQLDVTDRRYGLLRKSALASLHSGNKKLALNYARELKLVTQSREKCSSLLSRVEEVLGIIADAESTKKVAEAMQIGARAIKENKISVEDVDLCLRDIQESIDSHKEVEKMLEQTPSYVDIEDEDIEEEFKKLELAVGKEAQVPALEKTIGAEERTAVEAAEFISDAFSNLKLSDHPAGKPGVTQAVSEGDKITKQLEMEAVCTVNVADKSPIICIFKD 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0511 456 PANTHER SNF7 FAMILY PROTEIN 109 411 - -
Ssu4g0511 456 Gene3D - 231 386 - -
Ssu4g0511 456 Pfam Snf7 233 380 IPR005024 GO:0007034
Ssu4g0511 456 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 109 411 IPR005024 GO:0007034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0511 K15053 - gmx:100783674 733.021