Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0487 ATGTCGGGTTACTCCCATGAGATTGAGGAGATCTCAGAAGGTGGTTACGCAGGAGATAGTAATGACAACGACGAGGATtctgaaaatgaaaagaagcaagcgagaagaagaaaaatgggtAGTTGTTTTGGAAAGAATACAGGGAAGGTAGTACTGCATCCATTCACAAAAGCGAAGAAGCAACTAGGGAGAATCAAAAGCAAAAAGGCTCTTGTTCCATCATCACAGTCGAGGAATGCAAGTAAGAAGATTGTTGGCGATGAGGGTACCAGAAGAGGAAGTGGGTGGAGTAAAAAGAGTTGTTGTTCCCGCCCCCAAGTGTTAGAAACGCCTGAAAATGAGTCTCCTCCTAGTGACCCCAATGACCCTAGGTTCACTCCTCAGATGTTGCAAACTTGGATGgacaataatgatttttattccAAAGAATCCAATCCCCACCAGGATTAG 450 0.3933 MSGYSHEIEEISEGGYAGDSNDNDEDSENEKKQARRRKMGSCFGKNTGKVVLHPFTKAKKQLGRIKSKKALVPSSQSRNASKKIVGDEGTRRGSGWSKKSCCSRPQVLETPENESPPSDPNDPRFTPQMLQTWMDNNDFYSKESNPHQD 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0487 149 MobiDBLite consensus disorder prediction 96 115 - -
Ssu4g0487 149 MobiDBLite consensus disorder prediction 61 149 - -
Ssu4g0487 149 PANTHER OS07G0633900 PROTEIN-RELATED 6 148 - -
Ssu4g0487 149 MobiDBLite consensus disorder prediction 124 141 - -
Ssu4g0487 149 MobiDBLite consensus disorder prediction 1 49 - -
Ssu4g0487 149 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE-LIKE PROTEIN 6 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0487 Ssu-Chr4 7733167 7733616 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0487 - - gmx:102669075 130.183