Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0469 ATGAGCACCAGCTCGTCAAATTCAGATGCTTCCGTTGATCTATGGTCACAAATCGTGGCCGCTGGAACCCCCAACCCCCAACAAATCGACGTCGTTTACCGGAGAAGACACCCTCGCAATCCCCAAAACCATGCCAACTCAAAGCCTTCCGATTCTGCTCTTCCGCGTCCGATCCGGGTGAGTTTGGCCGACCCAAACAAGCGAGTCAGTTGGAATCGTGCTCTTTCCACCAGAGGGAGGACAAGTATAGCCGTTGGCGCATGTATGGTTTATCAGCCTCAGTTAAAGAAGGACAAAAGGAAAGGCAAACCTGCTCTTCCCAAAGGAAAGCTTGTGCAGCCTCCAAACTTTGACAAGGAGAGGTTATACTTTCAAGAGGTTGACGCTTTTGAGTTGTTGGAGGAAAGTCCCTCACCCAAGAAAGTTGGCACATGGATCATAGGAAATAAGACAGAAGAGGGACCAATGCCAGCTATATGTTCCAGATTAGAAAAATGGTTACACTCTAGAAGCTTAAACCCCATCTGCGGTCCCTCTAGCACACTGTCCAAGATATTAGAGACTCCATCCACACGTTTGGAAGCTATTCGTGATATTGATTTCAATGATCTCGAGTTGAGAACATTGGAGCAAACAGAGCAAAGCAATTCACTACTGCATACCATCAAAACTAGGGACAAGAAGACTTCAATCCTTGAAAGTTTTGTTGAGAATGACGTTCATTTGCAAACAAATGATAAGATGCTGTTAGCTCAAAGTGGTGAAGGATGTGAAGATATTGAAGCTGCTGTTCAGAAACTTTCTCTGGCATCAACGTCATCTTCAATAGACGATGACCACATTAGTCCATTTTCAGCTCTATTGTCGATTTGTGGACAGTCTGCGCCTTCAGCGTTACAAGATATGTTCTCTAGttGCTCAGAAACTATTGTGAAAATTGGTGAAGGAACATATGGGGAAGCTTTCAAGGTTAATAACTATGTTTGCAAAATAGTTCCTTTTGATGGGGACTTCAGAGTGAACGGGGAAGTCCAAAAGAGATCCGAAGAATTGCTGGAGGAGGTGTTTCTTTGCAAAACTCTCAATCAATTGAGAAGAAAAGATGGAGTTTCTGATAATTTATGCAGCGCATTCATAGATTGCATAGAATTTAGAGTATGTCAGGGCCCTTATGATGCGGCACTAATTCGAGCATGGGAAGATTGGGATCTTAAACATGGCTCAGAGAATGATCACCCAAAAGAGTTCCCAGATAAACAGtGTTACGTGGTGTTTGTACAAGAACATGGTGGCAAGGATCTTGAAAGTTTTGCCCTCCTGGATTTTGACGAAGCAAGGGCTTTACTGGTTCAGGTTACGGCTGGGCTTGCAGTGGCTGAGTCTGCGTATGAATTTGAACATCGAGATCTTCACTGGGGAAATATACTTGTCAGCCGAAGTGATTCTGTAATGTTGCAGTTCACTCTCGATGGCAGGAATATGTTAGTCAAAACGTATGGATTAATAATATCTATTATTGACTTCACTTTATCAAGAATAAACACAGGTGATAGAATACTGTATTTAGATCTTTCCTCTGATCCTGACCTATTTAAAGGACCGAAAGGGGACAAACAGTCAGAAACATATCGGAGGATGAAGGAGGTGACTGAAGATTGGTGGGAAGGAAGTTATCCTAAAACAAACGTGTTATGGTTGATCTACTTGGTAGACATACTCCTCATGAAGAAATCGTTTGAACGTACTACTAAGCACGAGAGAGATCTACGCTCCTTTAAGAAACGTCTTGACAAGTATGATTCGACCAAGGAAGCAATGCTTGATCCCTTCTTCACTGATTTGTTCGTTGAGTCTGACCCAAAGTCTTAA 1869 0.4291 MSTSSSNSDASVDLWSQIVAAGTPNPQQIDVVYRRRHPRNPQNHANSKPSDSALPRPIRVSLADPNKRVSWNRALSTRGRTSIAVGACMVYQPQLKKDKRKGKPALPKGKLVQPPNFDKERLYFQEVDAFELLEESPSPKKVGTWIIGNKTEEGPMPAICSRLEKWLHSRSLNPICGPSSTLSKILETPSTRLEAIRDIDFNDLELRTLEQTEQSNSLLHTIKTRDKKTSILESFVENDVHLQTNDKMLLAQSGEGCEDIEAAVQKLSLASTSSSIDDDHISPFSALLSICGQSAPSALQDMFSSCSETIVKIGEGTYGEAFKVNNYVCKIVPFDGDFRVNGEVQKRSEELLEEVFLCKTLNQLRRKDGVSDNLCSAFIDCIEFRVCQGPYDAALIRAWEDWDLKHGSENDHPKEFPDKQCYVVFVQEHGGKDLESFALLDFDEARALLVQVTAGLAVAESAYEFEHRDLHWGNILVSRSDSVMLQFTLDGRNMLVKTYGLIISIIDFTLSRINTGDRILYLDLSSDPDLFKGPKGDKQSETYRRMKEVTEDWWEGSYPKTNVLWLIYLVDILLMKKSFERTTKHERDLRSFKKRLDKYDSTKEAMLDPFFTDLFVESDPKS 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0469 622 ProSiteProfiles Protein kinase domain profile. 307 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g0469 622 SMART serkin_6 307 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g0469 622 MobiDBLite consensus disorder prediction 38 61 - -
Ssu4g0469 622 PANTHER SERINE/THREONINE-PROTEIN KINASE HASPIN 69 617 - -
Ssu4g0469 622 SMART DUF3635_2 528 611 IPR024604 -
Ssu4g0469 622 Pfam Haspin like kinase domain 267 603 - -
Ssu4g0469 622 Gene3D Phosphorylase Kinase; domain 1 299 429 - -
Ssu4g0469 622 Gene3D Transferase(Phosphotransferase) domain 1 430 611 - -
Ssu4g0469 622 SUPERFAMILY Protein kinase-like (PK-like) 312 518 IPR011009 -
Ssu4g0469 622 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 69 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0469 Ssu-Chr4 7514714 7520409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0469 K16315 - gmx:100790036 1077.77