Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0457 ATGTCAGCGTCTTTCTCTTCAACCTTGGTTCCGTTCTCGGAATCTTCATTCGCATTCCCAAGACCAGCACATTTTTGCTCAAATTCAGTAACCGTTGCATCAAACAGCTTTCATTCGGTAACAGGAGGTGGTCGTCTCGCACTGAATGCTGGAGGCACCAGCTTGTGTCGAAGGTTTCGCGGTTTCGAACTGTGGATACTTGATAGACTCAACTTCCAATTCCAGCCACCAAAGCAACCTAAGAATAGAAATcacttcaaaaataatttagaaaatacagGTTTATCAAATGAAAAGGGATCGGTTTCTGATTCATCCTCAATTTTTCGTGTTCCTGATGATAAGGTCACTTCTACGGAGTCTCCATCCTTGCTGCAGACATGTTTCTCTGGTACTCCCATGGATGCTAGTAGAGGACCCTCACTTTGCATTGCTGTCATAGGAGCCACTGGTGAGCTAGCAAGGAGGAAGGTTTTCCCTGCCTTATTTGCCCTCTACTACAGTGGCTTCCTTCCTGAGAATGTAGGCATTTTTGGGTATTCAAGGAAGGATATAACTGATGAAGATCTGCGATCTATTATAGCTTCAACATTAACATGCCGAGTTGATCATCAAGAAAATTGTGGGGACAAATTAGATGCTTTCCTTAGTAGAACATATTACATTAATGGAGGCTATGACAATAAATATGGGATGTCCATGCTGAATGCCCGAATGGAGCAAATTGAGGAAGGATCCAAAACCAACAGGATATTCTACCTTTCTGTACCACAAGAAGCACTTTTGGATGTTGCGTCATGTCTTGCAAGCAGTGCTCAGACCCAAAAGGGATGGAATCGCATAATATTTGAGAAGCCATTTGGCTTTGATGCACTTTCTTCCCATAGGATGACACAATATCTTCTTTCAAACTTTCTAGAAAGGCAAATATATAGGATTGATCATCTTCTAGGAAGGAATCTCATTGAAAATCTCACAGTTTTAAGATTTTCAAATCTAGTTTTTGAGCCACTTTGGAGTCGTACTTACATACATAATGTACAGGTCGTTTTATCAGAGGACTTGGCCGTGCATCCAGGAAGATATTTCAGTGGCTATGGGATTATCCGTGATGTTGTTCACAGTCATGTGCTCCAAACAATTGCATTGCTTGCCATGGAACCACCAATAAGCCTTGAAGGAGAAGATATTCGAAATGAGAAGGTCAAGGTTTTGAGGTCAATCCGCAACTTGGAGCCTAAGGATGTCGTTCTTGGCCAATATAAAGCAAGTGGTGGAGACAAAGTTGATCCATGCTTAAATGGTCTGACACCTACTTATTTTGCTGCTGCActatacattgacaatgcacgATGGGACGGGGTGCCATTTTTGGTTAAAACAGGCTTGGGACTCATCAAACACCAAATGGAGATTCGGATTCAATTTCGTCACGTTCCAGGGAATGTATACCGTGAGTGCATCGGGCATAACATGGACCGTGCCGTAAATGAGCTCATTCTTCGCGATGTTCCTGATGAAGCTATTTTGGTGAGAGTTAACAACAAGGTTCCAGGATTAGGCTTACAACTGGACTCTTCAGAATTAAATTTGCTTTACAAGGACAAGTACAACATGGAGGTGCCGGATTCATATGAGCATCTTCTTCTTGATGTCATTGATGGGGACAACCATCTGTTTATGAGAAGTGATGAGCTGGCAGCTGCATGGAGCATTCTAACTCCAATTCTGAATGAGATAGATAAGGACAATATATCAGTGGAGCTTTATGAGATGGGGGGTCGCGGTCCTGTTGGGGCATACTACCTATGGGCAAAACATGGCGTGCGTTGGGTAGAAGATTAG 1845 0.4184 MSASFSSTLVPFSESSFAFPRPAHFCSNSVTVASNSFHSVTGGGRLALNAGGTSLCRRFRGFELWILDRLNFQFQPPKQPKNRNHFKNNLENTGLSNEKGSVSDSSSIFRVPDDKVTSTESPSLLQTCFSGTPMDASRGPSLCIAVIGATGELARRKVFPALFALYYSGFLPENVGIFGYSRKDITDEDLRSIIASTLTCRVDHQENCGDKLDAFLSRTYYINGGYDNKYGMSMLNARMEQIEEGSKTNRIFYLSVPQEALLDVASCLASSAQTQKGWNRIIFEKPFGFDALSSHRMTQYLLSNFLERQIYRIDHLLGRNLIENLTVLRFSNLVFEPLWSRTYIHNVQVVLSEDLAVHPGRYFSGYGIIRDVVHSHVLQTIALLAMEPPISLEGEDIRNEKVKVLRSIRNLEPKDVVLGQYKASGGDKVDPCLNGLTPTYFAAALYIDNARWDGVPFLVKTGLGLIKHQMEIRIQFRHVPGNVYRECIGHNMDRAVNELILRDVPDEAILVRVNNKVPGLGLQLDSSELNLLYKDKYNMEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWSILTPILNEIDKDNISVELYEMGGRGPVGAYYLWAKHGVRWVED 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0457 614 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 140 327 IPR036291 -
Ssu4g0457 614 Gene3D - 139 312 - -
Ssu4g0457 614 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 141 613 IPR001282 GO:0006006|GO:0016614|GO:0050661
Ssu4g0457 614 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 116 614 - -
Ssu4g0457 614 PRINTS Glucose-6-phosphate dehydrogenase signature 373 389 IPR001282 GO:0006006|GO:0016614|GO:0050661
Ssu4g0457 614 PRINTS Glucose-6-phosphate dehydrogenase signature 451 477 IPR001282 GO:0006006|GO:0016614|GO:0050661
Ssu4g0457 614 PRINTS Glucose-6-phosphate dehydrogenase signature 355 372 IPR001282 GO:0006006|GO:0016614|GO:0050661
Ssu4g0457 614 PRINTS Glucose-6-phosphate dehydrogenase signature 280 293 IPR001282 GO:0006006|GO:0016614|GO:0050661
Ssu4g0457 614 PRINTS Glucose-6-phosphate dehydrogenase signature 304 332 IPR001282 GO:0006006|GO:0016614|GO:0050661
Ssu4g0457 614 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 146 324 IPR022674 GO:0006006|GO:0016614|GO:0050661
Ssu4g0457 614 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 142 612 IPR001282 GO:0006006|GO:0016614|GO:0050661
Ssu4g0457 614 MobiDBLite consensus disorder prediction 78 107 - -
Ssu4g0457 614 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 327 611 IPR022675 GO:0004345|GO:0006006|GO:0050661
Ssu4g0457 614 Gene3D Dihydrodipicolinate Reductase; domain 2 313 613 - -
Ssu4g0457 614 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 116 614 IPR001282 GO:0006006|GO:0016614|GO:0050661
Ssu4g0457 614 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 314 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0457 Ssu-Chr4 7397821 7403200 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0457 K00036 - gmx:100796541 1103.58