Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0450 ATGGCAAGGGTGGTGGCACTCCAACAGAACCAACTATCTTTCTCTCCCTTAGCTTCCTCTCTTTCTGACTTCAGCGGAACCAGACTTCAAACTCAACTTCAGTTTAAGAGAAAATTATGGCAGCCAAAAGGGTCTTTCTATGTCTCCGCATCAAGCACCAAGAAAATCCTCATCATGGGAGGCACCAGGTTTATTGGTGTGTTTTTGTCTAGGCTCCTTGTCAAAGAGGGTCACCAGGTGACTTTATTTACAAGAGGTAAAGCGCCTGTCACTCAACAATTGCCAGGTGAATCAGACAGTGATTATGCTGATTTTTCTTCCAAGATCTTGCATTTGAAAGGAGACAGGAAGGACTTCGAATTTGTAAAATCCAGTCTCTCGGCACAGGGGTTTGATGTTGTTTATGACATAAATGGACGGGAGGCAGATAAAGTTGGGCCCATACTGGATGCTCTGCCTAATCTGCAACAGTTTATTTACTGCTCTTCTGCCGGTGTCTATCTCAAATCTGATCTATTACCTCATGCGGAGATTGATGCAGTTGATCCTAAGAGCAGGCACAAGGGAAAGCTTGAAACAGAGAGCTTTCTGCAATCAAGGGGTGTTAATTGGACTTCTATAAGGCCAGTCTATATCTATGGACCCTTGAACTACAACCCCGTCGAAGAGTGGTTCTTCCATAGATTGAAAGCTGGACGCCCAATTCCTATCCCCAGCTCAGGAATACAGATAACCCAACTTGGTCATGTTAAGGATTTGGCAAGAGCTTTTGTTCAGGTTCTTGGTAATGATAAGGCCAGCAAGCAAGTATTCAACATCTCGGGAGAGAAGTATGTCACGTTTGATGGGTTAGCAAGAGCATGTGCTAAGGCTGGTGGGTTCCCAGAGCCAGAGATCATTCACTACAACCctaaagattttgattttgggaaaaagaagTCATTTCCATTCCGTGACCAGGTGAAACAACCCAACAAATCTGATACAATAAGAAAAGAGGATGGGCACGTGTCTGTCACTTTTATAGTTTATCACAAATTGACATCAGTATAA 1053 0.4274 MARVVALQQNQLSFSPLASSLSDFSGTRLQTQLQFKRKLWQPKGSFYVSASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKDFEFVKSSLSAQGFDVVYDINGREADKVGPILDALPNLQQFIYCSSAGVYLKSDLLPHAEIDAVDPKSRHKGKLETESFLQSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGIQITQLGHVKDLARAFVQVLGNDKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQVKQPNKSDTIRKEDGHVSVTFIVYHKLTSV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0450 350 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
Ssu4g0450 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 304 IPR036291 -
Ssu4g0450 350 Gene3D - 55 331 - -
Ssu4g0450 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 51 320 - -
Ssu4g0450 350 CDD SDR_a1 54 307 - -
Ssu4g0450 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 51 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0450 Ssu-Chr4 7324724 7328032 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0450 - - gmx:100799721 614.379