Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0447 ATGGCTAATGCAATTATAATGCCGGGTTTTCTGCCCCGACCCATTACTCAGACGACGCCGTTTCAGTTGCCCAATTACACTCACTCCTTCCATTCCGCTCGCTCCTCCCTTTCCCTCACATCCCAATCgGTTAAAGCTTTTCCAGTTCCAAGGAGGAAAGCAATGTCCTTGCTCTTATCAAGTTACATTCTCTCAGAGGTTGGTTTAGCATTGGCTCAACAGTCTCCTGTGTTCCGCGAATATATAGACGCGTTTGATGGTTATTCTTTCAAGTACCCAGGGAATTGGATTCAAGTCCGAGGTGCCGGGGCTGACATATTCTTCAGGGACCCTTTTGTTCTTGATGAAAATCTATCTGTTGAAATTTCTTCACCGTCATCTTCCCAATACAAGAGTGTTGAAGACTTGGGTCCACCCCAAGAAGCTGGAAAGAAAGTGCTCAAACAGTATCTGACTGAGTTTATGTCTACTAGACTTGGTGTTAGACGTGAATCAAATATTCTTTCCACATCTTCAAGAGTGGCTGATGATGGCAAGTTATACTATCAAGTTGAGGTAAACATAAAGTCATATGCCAATAACAATGAGCTTGCTGTTATGCCACAAGACCGGGTGGTACGTCTGGAATGGGATCGGAGATACCTATCTGTTATTGGGGTTGAAAACAACCAACTGTATGAGTTGAGATTGCAGGTGCCAGAAAATGTGTTTTCAGAGGAGGAAAATGATCTTCGTCAAGTCATGGATTCGTTCCGAGTGAACAAGGTTGCCGGTTAG 777 0.4402 MANAIIMPGFLPRPITQTTPFQLPNYTHSFHSARSSLSLTSQSVKAFPVPRRKAMSLLLSSYILSEVGLALAQQSPVFREYIDAFDGYSFKYPGNWIQVRGAGADIFFRDPFVLDENLSVEISSPSSSQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVIGVENNQLYELRLQVPENVFSEEENDLRQVMDSFRVNKVAG 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0447 258 PANTHER - 34 257 - -
Ssu4g0447 258 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 72 253 - -
Ssu4g0447 258 Pfam PsbP 78 253 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Ssu4g0447 258 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC 34 257 - -
Ssu4g0447 258 SUPERFAMILY Mog1p/PsbP-like 79 253 IPR016123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0447 - - gmx:100792664 456.447