Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0436 ATGGATTTCCAGAAGAAGAGGGTTCAGTTTCTAGCCTTTGTCGCTGCCATCATTGCTCTTAGCATTACAGCTGAAAAATGCAGGCAGCTTGCTGGCGAGAAGGAGTCATCCCAGAGTGGAAAGTTTACATTCTTAAATTGCTTTGACATGACTTCTGGAACTTTAGCCTGTAGTGTGAAGGAAGGTGTGAAGCTCTACTTTTACAATATTAGAGCTGCTCATGTTGAAGGAGCAAGGCATGATGCAATGCAGTCTGCCCTTGTTGATGCTGTGAAGCAGGGAATGTCACAAACTGCTTCAGCAAAATACGCTAAGAAAGAAGGTGAAAAAGCAGCAAAATTGGCTTCCCGTAAAGCCAGGCGCATTATAGGTCCCATCATCTCTTCAGGATGGGATTTTTTTGAAGCTTTGTACTATGGTGGTACTCTCACTGAGGGGTTCCTCAGGGGAAGTGGTACTTTGTTTGGTACTTATGCTGGAGGCTTCCTTGGGGAGCAAAGGCTTGGGAGATTTGGTTACCTTGTTGGAAGTCACATGGGTAGTTGGGTTGGAGGTAGAATAGGGCTAATGCTGTATGATGTGGCTAATGGAGTGCATTTCTTGTTGCATTCTGTTCAAACACTTGGAAGTGAAGTTCAAGAAACTTGA 648 0.4444 MDFQKKRVQFLAFVAAIIALSITAEKCRQLAGEKESSQSGKFTFLNCFDMTSGTLACSVKEGVKLYFYNIRAAHVEGARHDAMQSALVDAVKQGMSQTASAKYAKKEGEKAAKLASRKARRIIGPIISSGWDFFEALYYGGTLTEGFLRGSGTLFGTYAGGFLGEQRLGRFGYLVGSHMGSWVGGRIGLMLYDVANGVHFLLHSVQTLGSEVQET 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0436 215 PANTHER EXPRESSED PROTEIN 1 212 - -
Ssu4g0436 215 PANTHER PROTEIN, PUTATIVE-RELATED 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0436 Ssu-Chr4 7094869 7096892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0436 - - gmx:100796894 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0436 4 7094869 7096892 Ssu7g1789 7 36376181 36377799 PCT