Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0428 ATGGAGCTCCAAACACGGAGCAGCAATAGTAGCTCCACCTCCGACGCAAACCCAGACCCCCCCCTCTTCGACGACATCGACAGCACGTGTTCCACACCCTACGTCAGCGCCCCTTCCAGTCCCGGCCGGGGACCCATCGCCACCGGCGGGTTCTTCTACAGCGCTCCGGCCAGCCCAATGCACTTCACCATAACCGCCGCTTCCACTCACTCGCCCTCTTCTTCTTTCGAGAAAAACTCCTCTTCCTGCGATTTTGAGTTCTCGGCCCGGTTCGGCTCGACCGGGGTGGGCGGGCCCGGTTCGATGAGCTCGGCTGACGAGTTGTTCTTGAACGGTCAGATCCGGCCCATGAAGCTCTCTACCCACTTGGAGCGTCCACAAGTGCTGGCTCCCGTGCTGGAtctggaagaagaagaagaagaggaaaacgAGGAAGTTGAATCGCGTGTACGAGGTAGAGATCTGAGGTTGCGCGATAAGTCTCTCCGAAGAAGAACCAGATCCTTGTCACCTCTGAGGAACACGCCTTTAGAGTGGACGGAAAACGAGGATGTGGTGAACGAGGAAAAAACGGACAAGAAGGAAAACGTGACTCCTTCGGTTTCGGGTGGAAGTGGGAGGAGTTCGAAGAGGTGGGTTTTCTTGAGGGATTTTCTGAGGAGCAAAAGCGAGGGAAGGAGTAACAATAAGTTCTGGTCCACTATTTCGTTCTCCCCCGCCAAGGACAAGAAGGCCCAAAATCAGGGAAATGGGCCTCAAAAATCTAAGAAGGTCGCCGGGAAGCCCACTAACGGTGTTGGCGGGAAGAGGCGCGTGCCGGCGTCGGCGCACGAGTTGCATTATAAAGCGAACCGAGCGCAAGCGGAGGAGTTGAGAAGGAAGACTTTTTTGCCGTATAGGCAGGGTTTGCTTGGGTGCTTGGGATTTAGTTCCAAAGGTTATGGTGCTATGAGTGGCTTCGCTAGAGCCTTAAACCCTGTCTCCTCCAGGCTTAAGTAA 999 0.5395 MELQTRSSNSSSTSDANPDPPLFDDIDSTCSTPYVSAPSSPGRGPIATGGFFYSAPASPMHFTITAASTHSPSSSFEKNSSSCDFEFSARFGSTGVGGPGSMSSADELFLNGQIRPMKLSTHLERPQVLAPVLDLEEEEEEENEEVESRVRGRDLRLRDKSLRRRTRSLSPLRNTPLEWTENEDVVNEEKTDKKENVTPSVSGGSGRSSKRWVFLRDFLRSKSEGRSNNKFWSTISFSPAKDKKAQNQGNGPQKSKKVAGKPTNGVGGKRRVPASAHELHYKANRAQAEELRRKTFLPYRQGLLGCLGFSSKGYGAMSGFARALNPVSSRLK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0428 332 MobiDBLite consensus disorder prediction 180 208 - -
Ssu4g0428 332 MobiDBLite consensus disorder prediction 238 272 - -
Ssu4g0428 332 PANTHER - 21 325 - -
Ssu4g0428 332 MobiDBLite consensus disorder prediction 238 254 - -
Ssu4g0428 332 Pfam Protein of unknown function (DUF1645) 105 298 IPR012442 -
Ssu4g0428 332 MobiDBLite consensus disorder prediction 1 18 - -
Ssu4g0428 332 MobiDBLite consensus disorder prediction 1 50 - -
Ssu4g0428 332 PANTHER EXPRESSED PROTEIN 21 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0428 Ssu-Chr4 7009093 7010530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0428 - - pvu:PHAVU_001G225700g 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0428 4 7009093 7010530 Ssu7g1778 7 36277073 36278281 PCT