Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0416 ATGGCAACCTTTCTACTCTTTCTACTAACTAGCCTTAGGCTAGTAATCAATGCATCAACCCTTAGTGCTTGTTCAAATTGTGGTGACTCTGCAGTCCCATACCCACTCAGCACTAATGAGGATTGTGGAGACAAAAGGTATAAAGTCTACTGTAACAATGGAAACTTAGAGTTCTTGTCAGCAACAGGTATTTATTATAGGATCCTTAAAATTGACCCAAGTGCTAACAAACTTGTGATTAGCCCACCCACTATATTAAAAAACACTTGTTATTCTTCTGATCTCTTCAAGGGAGGCTTGTTGCTTGATGAAAGCTTGCCCTTCAATATATCTACACACAATACTGTCATGTTGTTTAATTGCTCTGATAATATCCTTCAGTCTCCTTTGAATTGTTCTTCAAATAGTATTTGTAGGCAGTTTGAAGAAAAGGTGGAAGAAGGAATTGGGTGTATAGGCACCCTATGTTGCCATTACTTAAAGGATTCAGCCATGAATTCCCATAAGATTAGAGCTAGGGTTGGGAGTTGCACTGCTTACACCTGTTTGGTAGGTTTCAAGCCTGATGACCCTCTTGAAAATTGGAATTATGGGATTGAGCTACAATGGTTCCCACCCAATTGA 624 0.3926 MATFLLFLLTSLRLVINASTLSACSNCGDSAVPYPLSTNEDCGDKRYKVYCNNGNLEFLSATGIYYRILKIDPSANKLVISPPTILKNTCYSSDLFKGGLLLDESLPFNISTHNTVMLFNCSDNILQSPLNCSSNSICRQFEEKVEEGIGCIGTLCCHYLKDSAMNSHKIRARVGSCTAYTCLVGFKPDDPLENWNYGIELQWFPPN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0416 207 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 6 207 - -
Ssu4g0416 207 Pfam Wall-associated receptor kinase galacturonan-binding 24 80 IPR025287 GO:0030247
Ssu4g0416 207 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 6 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0416 Ssu-Chr4 6771722 6772345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0416 24 207 Receptor kinase-like Gene Family AT5G02070 38.421 2.88e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0416 - - cam:101515529 343.584