Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0098 ATGGCCGCCACACTCACTCTTCTAAAGCTTCCAATTCTTCCTAACAAGCCACTACTACTGCCACGCCCATCAACCTCAAAACTCGTTCCACTTCCTTCCTTCTATTCAAAGTTAGATATCCCAAAAGTTTCCATTTCTCCTAACCCACAAAAGTTCCCCTTCTTAGATCAAAACATCGATGCTCTCAAGCCTGCTTTTCTTTCCCTCACAGCAATCACATTTCCATTCTTATTAGAACCTAAGGATGCACTTGCTGTTGGTGGAGAGTTTGGGATATTGGAAGGAAGATCTTTTGCACTCATACACCCCATTGTGATGggttcttttttcttctataccTTGTGGGCAGGGTATTTGGGGTGGCAATGGAGGCGGGTTAGGACTATCCAGAATGAGATTAATGAACTCAAGAAACAAGTCAAACCTACCCCAGTCACCCCAGATGGGAAACCAGTGGAAACTTCACCCTCACCTGTTGAACTCCAAATACAGCAACTCACTGAGGAAAGGAAAGAGCTGATCAAAGGTTCTTATAAAGATAGACACTTCAATGCAGGATCCATTCTTTTAGGATTTGGGGTGCTTGAGTCAATTGGTGGAGGAGTGAACACATGGTTTAGGACAGGAAAGCTGTTTCCCGGTCCACATTTATTTGCAGGAACAGCGATTACCGTTTTATGGGCACTGGCAGCAGCCCTAGTACCATCAATGCAAAAAGGAAATGAAACAGCCAGAAATCTTCACATCGCGCTGAATACATTAAACGTTCTGCTCTTTGTGTGGCAGATTCCCACTGGAATTGACATTGTATTCAAGGTGTTTGAGTTCACAACATGGCCATGA 843 0.4306 MAATLTLLKLPILPNKPLLLPRPSTSKLVPLPSFYSKLDIPKVSISPNPQKFPFLDQNIDALKPAFLSLTAITFPFLLEPKDALAVGGEFGILEGRSFALIHPIVMGSFFFYTLWAGYLGWQWRRVRTIQNEINELKKQVKPTPVTPDGKPVETSPSPVELQIQQLTEERKELIKGSYKDRHFNAGSILLGFGVLESIGGGVNTWFRTGKLFPGPHLFAGTAITVLWALAAALVPSMQKGNETARNLHIALNTLNVLLFVWQIPTGIDIVFKVFEFTTWP 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0098 280 Pfam Protein of unknown function (DUF4079) 99 273 IPR025067 -
Ssu4g0098 280 PANTHER - 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0098 Ssu-Chr4 1653645 1655189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0098 - - gmx:100798854 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0098 4 1653645 1655189 Ssu4g0098 4 1653645 1655189 ECH
Ssu4g0098 4 1653645 1655189 Ssu4g2990 4 76352247 76354574 PCT