Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3362 ATGATGGGTGGAAGTTCTattgatgatgattgggagctCACTTCCTCATCTAATGAGGTTCGAACAGTGGTCTTAGTTGGACGTACAGGCAATGGCAAGAGTGCAACAGGTAATACTATTATTGGAAGGAAGGTCTTCAAGTCAAGGGCAAGCTCCTCTGCTGTAACCACCTCATGTGAATTGCAGACAACAGAACTAAATGAGGGTCAAATTGTTAATGTTATTGACACCCCAGgattatttgatttttctgcCGGATCTGAGTTTGTTGGAAAGGAAATTGTCAAATGCATTGATTTGGCCAAGGATGGGATCCATGCTGTCCTTGTAGTGTTCTCTGTTAGAACACGCTTTACTGAGGAAGAAGAAACTGCTCTACGCAGCTTGCAGACATTATTTGGAAGCAAAATTGTTGATTACATGATTGTGGTCTTCACTGGAGGAGATGAATTGGAAGAAAATGATGAGACACTTGAGGATTATTTAGGCCGCGAATGTCCAGAGCCTTTAAAGGAAATTCTTTTCCTGTGTGAGAATCGCTATGTACTTTTTGATAACAAGACTAAGGATGAAAGGAAGCGCTTTGGACAAGTTCAACAACTTCTCTCTTTTGTAAACATGGTTCTATCACGGAATGGTGGACGACCTTATACAGATGAGTTATTTACAGAACTAAAGAAGGGAGCAATGAAGCTGCATAACCGACAAAGAGAGGTTGATTCTTTAAAAGGATATTCAAAAGGAGAGATATTGGAGTTTAAAAAGCAAATGCAGCAAACATATGATGGCCAATTAAAGCGAATTACTGAGATGGTTGAATCAAAGTTGAGGGAGGCAACTATGAGGCTTGAGCAACAATTGGCAGAAGAGCAAGCTGCAAGACTTAAGGCAGAGGAGAATGCAATGTTAGCTCAAAAGAGATCAGATGAAGAAATACGAAAACTCAGAGAACATCTTGAGAAGGCACATGAAGAACTTCGCAAGCGAGGTGAAGGTCGTTGTGCCATTCTTTGA 1014 0.3945 MMGGSSIDDDWELTSSSNEVRTVVLVGRTGNGKSATGNTIIGRKVFKSRASSSAVTTSCELQTTELNEGQIVNVIDTPGLFDFSAGSEFVGKEIVKCIDLAKDGIHAVLVVFSVRTRFTEEEETALRSLQTLFGSKIVDYMIVVFTGGDELEENDETLEDYLGRECPEPLKEILFLCENRYVLFDNKTKDERKRFGQVQQLLSFVNMVLSRNGGRPYTDELFTELKKGAMKLHNRQREVDSLKGYSKGEILEFKKQMQQTYDGQLKRITEMVESKLREATMRLEQQLAEEQAARLKAEENAMLAQKRSDEEIRKLREHLEKAHEELRKRGEGRCAIL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3362 337 PANTHER BNAC06G07830D PROTEIN 2 327 - -
Ssu3g3362 337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 192 IPR027417 -
Ssu3g3362 337 Gene3D - 21 236 IPR027417 -
Ssu3g3362 337 ProSiteProfiles AIG1-type G domain profile. 18 226 IPR006703 GO:0005525
Ssu3g3362 337 Pfam AIG1 family 21 234 IPR006703 GO:0005525
Ssu3g3362 337 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 2 327 IPR045058 -
Ssu3g3362 337 CDD AIG1 21 227 - -
Ssu3g3362 337 Coils Coil 273 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3362 Ssu-Chr3 90537602 90541445 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3362 - - gmx:100801425 608.216