Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3357 ATGCGCACTCTCTCAATGCCATGCCTCTCCTCTTCTCTTCACACTCACAGTCACACCTGCCATTACCACTGTCGCTTCTCTCCCCCCTCTTCTTTTATCTTCACACCCCACAGACGCTCTCACTTCCTCACCCCATGCTCTTCCctgagacagagagagagagagagcaaaaaGCAACTAGGCAAGATCAACACTGCCCCATCTGAGTCTGGGTCTGGCTTAAAGCGCTTGTTTAGCCCCAAGAGCGACGGGGACGGGGACGGGGACAAGGACAAGACCGACTCCGACCTCGACTTCCAGGATGGCACCGCCTTGAAGGGCACCCTCTTGGCCGGTGTCTTGCTCGTCGGTATTGTTGGCGGTTTTGCCTCCGTTGGCTATATCTACAAGGACCAGATCAATTCCTTCTTGAACCAATTCTCCGTCTTTATTGAAGGTTATGGTCCAGCTGGATACGCGTTATTCGTTGCCGTTTATGCTGGATTGGAGATCCTTGCAATTCCTGCCATTCCTTTAACCATGTCAGCTGGACTTCTATTTGGATCTATTATCGGCACTATCATAGTCTCTATCAGTGGAACAGTGGCAGCCAGTGTTGCTTTTCTAATTGCAAGATATTTTGCTCGTGAGCGAATTGTAAAACTAGTGGAAGGAAATAAGAAGTTTCTTGCTATTGACAAAGCAATTGGAGAAAATGGCTTCAGGGTTGTGACCCTACTTCGTTTGAGCCCTCTGCTGCCATTTTCTTTGGGGAATTATTTATATGGATTGACATCTGTTAAGTTTATTCCATATGTATTGGGAAGTTGGTTGGGGATGCTTCCAGGGACATGGGCTTATGTTAGTGCTGGTGCTTTTGGAAGAGCAATAATTGTGAGTTTGTACTTGGTTTTTTTTGTGCTCTTGGTTATTCAATCATTATTGggattttttttggctttcatTAGCttcatgtttttgttttcttcttttcatccTTTTCTGAGTTTGTTTTGTGGGAGGGTTATGAGATGGTGA 1017 0.4297 MRTLSMPCLSSSLHTHSHTCHYHCRFSPPSSFIFTPHRRSHFLTPCSSLRQRERESKKQLGKINTAPSESGSGLKRLFSPKSDGDGDGDKDKTDSDLDFQDGTALKGTLLAGVLLVGIVGGFASVGYIYKDQINSFLNQFSVFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSIIGTIIVSISGTVAASVAFLIARYFARERIVKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFIPYVLGSWLGMLPGTWAYVSAGAFGRAIIVSLYLVFFVLLVIQSLLGFFLAFISFMFLFSSFHPFLSLFCGRVMRW 338
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3357 338 Pfam SNARE associated Golgi protein 167 285 IPR032816 -
Ssu3g3357 338 MobiDBLite consensus disorder prediction 80 95 - -
Ssu3g3357 338 PANTHER - 7 292 - -
Ssu3g3357 338 MobiDBLite consensus disorder prediction 52 95 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu3g3357 Ssu-Chr3 90433665 90436508 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3357 - - var:108340290 442.195