Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3340 atgatGATGAATGTTCTAGGGCTGAGTCTGGTGGTAACTTCACTGGCAGCAGCGGGCATATTTTCGCCCAGTGCAGATCAGACGCAGCAGAAGCAAGGAGCGAGCACCATTGTGAAAGAAGGGCACAGAGTTGTGGTGGTTGAGTACGACCAAGGTGGCCATCAGAACACCAAAATCTCAATATCCCCAGAGCAACCCCAACATGATCACGATGACAATCACATAGACAACGCCAAACATAAAATCAAAGAGGCTGCCTCGGTTCTCCCTAACTTGGGTCAAAGCATTTCACAGCACCCCGAAGATGCACCCACCTTTCTGCATGCCCCTAAAGAGCTCATTGGCGATGCCTATGGAAAATGTAAGCACAAAATCGCGGATGCAATGGAGAAGACCAAGGATAAGGCTCAAGAGGCCCTCCACAGCCAAGTTGGTGATACTGTTGCTGACGCACTTAGAAACACCAAACAAACCGTGTATGATAAAGCCCGTGATGTCCAAGAGACTGCAGAAACAGCAAAGGACCATATAGTTGCTAACGTCTCAGAGGCGAGGGATACTTTGCGCCACGTGAAACATGCATTATTCAAGCGTCTAGAATCCATGGAGAGCCTGAATTCTTTGATGGGGGTGGCTAATTTGCTGGGCTTTGCCACGGCCTATGGGATGTGTGTGTGGGTTACGTTCATCTCCAGCTATGTGCAGTCCAGAGCTATGCCAAGGCAACAATTTGCAGTGGTACAGAGTAAAATTTACCCCGTTTATTTCAGGGCCATGGCTTATAGCATTGGGGTCGCTTTATTGGGCCATGTCTTAGCCCATACATTGCAACTATACAACCTTCTCGCCTCGCTTGTCACAGTTTTCGTCAATTCTGTTTACTTGGAGCCTCGGGCCACCAAGTTGATGTTCgaaaggataaaaatagaaaaagaagaaggaagaggcAGAGAAGATTTGAGTGGTGAACACAGCAGAACAGGAGAGCATCAGCGCGCAACTGATCCTAAAGAGCCTTCCACGACCGCAGATCAGGATGCAGTCAGATCAAGGATAATCAAGCTCAATGACAAGCTCAAGAAATTGAATTCATACTCCTCACTCCTGAATATCCTGAATCTCATGTCTCTTACCTGGCATCTCGTTTATTTGGCTCAACGACTTCACCATACTTGCTAA 1179 0.4623 MMMNVLGLSLVVTSLAAAGIFSPSADQTQQKQGASTIVKEGHRVVVVEYDQGGHQNTKISISPEQPQHDHDDNHIDNAKHKIKEAASVLPNLGQSISQHPEDAPTFLHAPKELIGDAYGKCKHKIADAMEKTKDKAQEALHSQVGDTVADALRNTKQTVYDKARDVQETAETAKDHIVANVSEARDTLRHVKHALFKRLESMESLNSLMGVANLLGFATAYGMCVWVTFISSYVQSRAMPRQQFAVVQSKIYPVYFRAMAYSIGVALLGHVLAHTLQLYNLLASLVTVFVNSVYLEPRATKLMFERIKIEKEEGRGREDLSGEHSRTGEHQRATDPKEPSTTADQDAVRSRIIKLNDKLKKLNSYSSLLNILNLMSLTWHLVYLAQRLHHTC 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3340 392 Pfam Domain of unknown function (DUF4149) 216 306 IPR025423 -
Ssu3g3340 392 MobiDBLite consensus disorder prediction 315 346 - -
Ssu3g3340 392 Gene3D Helix hairpin bin 107 199 - -
Ssu3g3340 392 PANTHER - 2 194 - -
Ssu3g3340 392 PANTHER - 144 392 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3340 - - lja:Lj3g3v3754400.1 461.07