Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3327 ATGGGTTGCAGTAGCATCAATTTGAATACGGCAGCGGCATCAATTCGTTTCGCTTTGGCCACTCCAACTGAAACTAACAAGAAGGCGCAACGTGGATGCTCTTTTCCTGTTATTCCGCAACGCCAACGCCCACGCGCTTGTCGCTTCTTTTGCGGCGACTTTCGATCTCCTTTCGCTCCAAACGCCATCCCTTCTCATTCTCTGATTGTGTCGAATGAGGCGCTGAATGTTATGATTTCTGGGGCTCCTGCTTCTGGTAAAGGAACCCAATGCCACCTCATCACCAACAAGTACGGTTTGGTGCATGTTGCTGCTGGAGATTTACTTAGGGCAGAAATTGCCACAGGAAGTCAAAATGGAAAGCGAGCCAAGCAATATATGGAGAAGGGACAGTTGGTCCCTGACGAAATTGTTGTCATGATGGTCAAGGACCGCCTCCTGAAACCAGATTCTAAAGAGAATGGTTGGCTTCTCGATGGATATCCCAGGAGCTTATCACAGGCTACTGCACTTAAGGAATTTGGGTTCGAACctgatatttttcttcttctagaGGTTTCTGAAGATGTTCTTGTGGAGAGAGTAGTTGGACGGAGATTAGATCCTGTTACTGGGAAGATATATCACTTGAAGTATACTCCGCCAGAGACAGAAGAAATTGCAGCAAGGCTTACCCAACGCTTTGATGATACTGAGGAAAAGGTGAAGTTGCGATTGAACACCCATCATCAAAATGTGGAGTCAGTTCTTTCCTTGTATAAACACATAACTGTTAAGATTAATGGAAATGTCTCAAAGGAGGAAGTATTTGCTCAAATTGATAGTGCACTGACAAGTCTTGTAGAGCACAGGGACGCTGCTTCAGGATCTGTGGCAGCATAG 882 0.449 MGCSSINLNTAAASIRFALATPTETNKKAQRGCSFPVIPQRQRPRACRFFCGDFRSPFAPNAIPSHSLIVSNEALNVMISGAPASGKGTQCHLITNKYGLVHVAAGDLLRAEIATGSQNGKRAKQYMEKGQLVPDEIVVMMVKDRLLKPDSKENGWLLDGYPRSLSQATALKEFGFEPDIFLLLEVSEDVLVERVVGRRLDPVTGKIYHLKYTPPETEEIAARLTQRFDDTEEKVKLRLNTHHQNVESVLSLYKHITVKINGNVSKEEVFAQIDSALTSLVEHRDAASGSVAA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3327 293 Pfam Adenylate kinase 79 255 - -
Ssu3g3327 293 CDD ADK 76 269 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu3g3327 293 Hamap Adenylate kinase [adk]. 75 278 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu3g3327 293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 280 IPR027417 -
Ssu3g3327 293 PANTHER ADENYLATE KINASE 8 53 284 - -
Ssu3g3327 293 Gene3D - 71 290 IPR027417 -
Ssu3g3327 293 SUPERFAMILY Microbial and mitochondrial ADK, insert "zinc finger" domain 197 227 IPR036193 GO:0004017
Ssu3g3327 293 PANTHER NUCLEOTIDE KINASE 53 284 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu3g3327 293 TIGRFAM adk: adenylate kinase 76 277 IPR006259 GO:0004017|GO:0005524|GO:0016776
Ssu3g3327 293 PRINTS Adenylate kinase signature 156 172 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu3g3327 293 PRINTS Adenylate kinase signature 78 91 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu3g3327 293 PRINTS Adenylate kinase signature 106 120 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu3g3327 293 PRINTS Adenylate kinase signature 227 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu3g3327 293 ProSitePatterns Adenylate kinase signature. 156 167 IPR033690 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3327 Ssu-Chr3 89997530 89999732 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3327 K00939 - gmx:100784319 457.603