Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3320 ATGGCGTCACTATCAGCATCCCTGAAATTGAAAAAGCTGAGCAGAGGTGGAGCGTTTAGTTGTCGGAAATGGAATCGGAGTTATTCGAAGTTGAGCCATGCAGAGGGAGAGAGAGACGTAGAGGAGGTTCCGAGTTCGGGAATCTGTAGGCCGCTCTCTGAAATACTGAAAGAGCTAAACAAGAAAGTCCCCGATTCCCTTGTCAAAACCCGCCTCGAGAACGATGGCTTCCCCATCAGATACATTCCCTGGCATGTTGTGAACCGCGTTTTGAACTTACACGCTCCTGAGTGGTCTGGTGAGGTTCGGAATATCACCTACTCCCTTGATGCCAAGTCTGTCTCTGTTGTCTACCGAGTTACCCTTTATGGGACTGATGCTGAGATATTTAGGGAATCAACTGGTACTGCTTCGGTAGATGACACAAGTTATGGAGATCCTGTACAGAAGGCAGAAGCAATGGCTTTTCGTAGAGCTTGTGCACGCTTTGGGCTGGGGCTCCACCTTTATCACGAAGATGCATCATAA 528 0.4848 MASLSASLKLKKLSRGGAFSCRKWNRSYSKLSHAEGERDVEEVPSSGICRPLSEILKELNKKVPDSLVKTRLENDGFPIRYIPWHVVNRVLNLHAPEWSGEVRNITYSLDAKSVSVVYRVTLYGTDAEIFRESTGTASVDDTSYGDPVQKAEAMAFRRACARFGLGLHLYHEDAS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3320 175 Gene3D DNA repair protein Rad52/59/22 50 175 IPR042525 -
Ssu3g3320 175 PANTHER DNA REPAIR RAD52-LIKE PROTEIN 1, MITOCHONDRIAL 29 174 - -
Ssu3g3320 175 Pfam Rad52/22 family double-strand break repair protein 53 173 IPR041247 -
Ssu3g3320 175 PANTHER - 29 174 IPR037489 GO:0000724|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3320 Ssu-Chr3 89894428 89896324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3320 - - gmx:100782719 275.018