Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3311 atgggGTTAGGGGTGAGAGAGATAAGCTGTAGTGGAGAGCCCGTCCTTGACAGTGAGAATGGGGAGGAGTTGATGCGGCTACAGCCTGGTGTAGACGTAGTCCTGGGTGATCTTCCTTGTGAGTCTCCTGGCACGCTCTATATCACTACCAAGCAAGTAATATGGGTGAGTGATGTAGACAAGACTAAAGGATATGCTGTTGATTTTTTATCTATATCTCTCCATGCCATCTCTAGAGACCCCGATGCCTACCCTCTTCCTTGTTTATATACCCAGATTGATACAGAAGAAGCAGATGAGGATCACTCTGATTCCGAATCCAATCATATCCAACAAGATTTGTCCAACATCACAGAGATGAGGCTCATTCCCTCTGATCCTACTcaatTGGACGCTCTCTTTGCAATATTCTGCCAATGTGCAGAGCTTAATCCAGAACCAAATGATGaggaaggagaagaacATGATTGGGTTTTCAGCGCTGATCAGATGGAAGATGAAGAAGCAATAGaTGATGAAGGTTATATGTCTCACAATCCAGCCAACTCTATTGGTCACTCAAATGGAAATCATGACCTAGCTCGTACCATACTTGAGCTTCAAATCAATGATCGAAGATTTGAGGATGCAGAAGAGATGGAGGATGATGGAGATGACACCCATCATTAA 669 0.4245 MGLGVREISCSGEPVLDSENGEELMRLQPGVDVVLGDLPCESPGTLYITTKQVIWVSDVDKTKGYAVDFLSISLHAISRDPDAYPLPCLYTQIDTEEADEDHSDSESNHIQQDLSNITEMRLIPSDPTQLDALFAIFCQCAELNPEPNDEEGEEHDWVFSADQMEDEEAIDDEGYMSHNPANSIGHSNGNHDLARTILELQINDRRFEDAEEMEDDGDDTHH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3311 222 PANTHER BNAA02G33340D PROTEIN 6 218 - -
Ssu3g3311 222 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 115 127 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Ssu3g3311 222 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 64 78 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Ssu3g3311 222 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 41 56 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Ssu3g3311 222 PANTHER CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN 6 218 IPR039924 -
Ssu3g3311 222 Pfam Regulator of volume decrease after cellular swelling 44 169 IPR039924 -
Ssu3g3311 222 Gene3D - 17 152 IPR011993 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3311 K05019 - gmx:100790816 390.963