Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3307 atgaaCATCACCGATTACGCCTTCGGGGACTCCAAGAAATACGAGGGGTCCTCGGAGTTCGTGAAGCTGAGGTACCACATGGGACCGGTTCTCACGACCAACATCACCGTCCACACCATCTGGTACGGCAAGTGGGAGAGGAACCAGAAGAAGATCATCCGCGGGTTCATCAACTCAATCTCCGCCGCGGAGGCGCCGCGCCCCTCCGTCGCCGGGTGGTGGCGCACCGTCCAGCTCTACACGGACCAGACCGGAGCGAACATTTCAAAAACGGTTCGACTCGGGGAAGAAAAAAACGACCGGTTCTATTCCCACGGGAAATCGCTGACCCGGCTATCCATACAGTCTGTGATAAAGAGCGCCATCACAGCCAAAACGAAGCCGTTGCCGATCAACCCGAGGAGCGGGTTATATCTGTTGCTCACCGCCGATGACGTGTACGTTCAGGATTTCTGCACGTCGGTGTGCGGGTTCCACTACTTCACGTTTCCCTCGCTGGTTGGGTACACCCTTCCGTACGCTTGGGTGGGTAACTCCGCTAAGTTCTGCCCTGGCCAGTGTGCGTACCCCTTTGCCGTGCCCGCGTATATCCCTAACCATAAACCGTTTAAGTCCCCAAACGGCGACGTTGGGGTGGACGGCATGATCAGCGTGATTGGGCACGAGATGGCTGAGCTGGCAACGAACCCGTTGGCCAATGCTTGGTATGCGGGTCAGGACCCGTCTTTCCCCGTCGAGATTGCGATCTGTGCGAGGGGATTTACGGCACCGGGGGCGGTGGATCCTACACCGGCCAGGTTATGGACGCTCGAGATGGTGCCACGTATAACATGA 834 0.5767 MNITDYAFGDSKKYEGSSEFVKLRYHMGPVLTTNITVHTIWYGKWERNQKKIIRGFINSISAAEAPRPSVAGWWRTVQLYTDQTGANISKTVRLGEEKNDRFYSHGKSLTRLSIQSVIKSAITAKTKPLPINPRSGLYLLLTADDVYVQDFCTSVCGFHYFTFPSLVGYTLPYAWVGNSAKFCPGQCAYPFAVPAYIPNHKPFKSPNGDVGVDGMISVIGHEMAELATNPLANAWYAGQDPSFPVEIAICARGFTAPGAVDPTPARLWTLEMVPRIT 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3307 277 PANTHER PROTEIN EXORDIUM-LIKE 5 8 251 IPR006766 -
Ssu3g3307 277 Pfam Phosphate-induced protein 1 conserved region 23 259 IPR006766 -
Ssu3g3307 277 PANTHER PROTEIN EXORDIUM-LIKE 3 8 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3307 Ssu-Chr3 89720260 89721093 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3307 - - gmx:100813279 501.901