Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3278 ATGAAGAAGGacaaagagaaggagaagattgTGACAAGCCCTGTGAGTGGTGAAGACAGCGATGATAAGCAACGCCCTTCCTTTACCTCCGTCAGATCCTTTTCCCGTAACGCTTCCTCCAAATATGATTTCGTCAAGGTAAAGGTGTGGTTGGGTGATAATGCGGACCACTACTATGTTCTCTCCAGATTTTTGCTCAGCAGAATGCTTACGGTAACCAAGATTCCAAACCATGTAGCTATCAAAATTGCTCTCGAACTGAAGAAGCTGCTCATAGACAACAGCCTTCTAGATGTCTCTCAATCTGACTTGGAAGCCAACCTATTTAAGCTTATGGAGCGGCGGGGATATGGAGAAGAGTACATAAATCGTTACAAGATGATGACGGGATTTCACCATCAAAGAGTTCCATTAGTCATCCTTGTCTGTGGAACTGCTTGTGTTGGAAAGTCTACTATTGCCACCCAGCTTGCACAGAGGCTAAATTTACCAAATGTATTACAGACAGATATGGTTTATGAATTGTTGCGCACATCAACAGATGCACCATTGGCGTCGACTCCTGTATGGACCAGAGACTTCAGTTCGTCAGAAGAGCTAATAACTGAATTTTGCAGAGAATGCAGGGTTGTTCGCAAAGGATTGGCCGGTGATCTGAAAAAGGCAATGAAAGATGGGAAGCCAATTATAATTGAGGGAATACATTTGGATCCTAGCATTTATTTAGTGGACAATGAGAATAAATCACCTTCTGGTGTACATtcagaaaataaagagataaatcCAGCATCTGTGATATTGGATGATAATGCTAccgtacaaataaaaaatattcacgtGGGTAGCAGTGATGAGATTAATGGTGGCTCCAGGATTTTGAGCTCTAATGAAGGAGTATCTGCTGACCAGGTTGATGCAGTATCAAATTCTATGGCATCCATGGGCCTAATTGGAAGCATCCCTGGACAAAAAGGTGCTTCTCTTAGGGAACTGGAGACAGACAAAACTATGATTAGTAAAGCGAAGTCAGGTCCCAAACCAATAATTGTGCCTATTGTTTTGAAGATGGCTGAATTTGATCATAAGGCATTACTTGAGGAGTGGATCTCTGCTCGCACATTTAATGACAAATGCCCAGACCTGGATAATGAGAAGCTTATAGCCAACTTGAAAACCATACAGGATTATCTGTGCTCATTCACATCACAGGGGTTGACTGTGGTCAATGTATCGGCAACAACATTTCCTCAGACATTGGATTGGCTGCATGGTTACCTTCTTcaggtaaaaattttattagatgtaaCATTTGGATTTTGGTACATCTTAAGAGTATATTTATCTTCTAGTCAATACTCAATCTTGCTTTATGATTGA 1377 0.3922 MKKDKEKEKIVTSPVSGEDSDDKQRPSFTSVRSFSRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKIALELKKLLIDNSLLDVSQSDLEANLFKLMERRGYGEEYINRYKMMTGFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLASTPVWTRDFSSSEELITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLVDNENKSPSGVHSENKEINPASVILDDNATVQIKNIHVGSSDEINGGSRILSSNEGVSADQVDAVSNSMASMGLIGSIPGQKGASLRELETDKTMISKAKSGPKPIIVPIVLKMAEFDHKALLEEWISARTFNDKCPDLDNEKLIANLKTIQDYLCSFTSQGLTVVNVSATTFPQTLDWLHGYLLQVKILLDVTFGFWYILRVYLSSSQYSILLYD 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3278 458 MobiDBLite consensus disorder prediction 1 30 - -
Ssu3g3278 458 Gene3D - 139 261 IPR027417 -
Ssu3g3278 458 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 19 428 - -
Ssu3g3278 458 Pfam AAA domain 140 242 - -
Ssu3g3278 458 MobiDBLite consensus disorder prediction 1 26 - -
Ssu3g3278 458 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 19 428 - -
Ssu3g3278 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 242 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3278 - - gmx:100812099 770.385