Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3270 ATGCATTCACCTTGGTATAATAGCTATAATTATCACTATATGGAAGGGGAAACAATGAGAGTAATGTATGAGCCCTGGTTTGTGAAATACAAGGTCGATGTTGTGTTTGCTGGCCATGTTCATGCCTATGAACGATCTGAGCGTGTTTCCAATGTTGCATATAATGTTGTAAATGGTCTCTGCACTCCTGTAAAAGATCAATCAGCTCCTGTATATATAACAATTGGTGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAGCCAGAGTATTCTGCATTCCGAGAGGCCAGCTTTGGACATGCCATTTTTGACATAAAGAACCGAACACATGCTCACTACAGCTGGCACCGAAACCAAGATGGATTTTCTGTGGAGGCTGATTCCGTTTGGTTTTCCAACAGATACTGGCACCCAGTTGATGATTCCACCACTCGTGTTTCACATTAA 462 0.4242 MHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVFAGHVHAYERSERVSNVAYNVVNGLCTPVKDQSAPVYITIGDGGNLEGLATNMTEPQPEYSAFREASFGHAIFDIKNRTHAHYSWHRNQDGFSVEADSVWFSNRYWHPVDDSTTRVSH 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3270 153 Pfam Calcineurin-like phosphoesterase 2 43 IPR004843 GO:0016787
Ssu3g3270 153 PANTHER ACID PHOSPHATASE RELATED 2 148 IPR039331 GO:0003993
Ssu3g3270 153 PANTHER PURPLE ACID PHOSPHATASE 2 148 - -
Ssu3g3270 153 SUPERFAMILY Metallo-dependent phosphatases 1 147 IPR029052 -
Ssu3g3270 153 Gene3D - 1 148 IPR029052 -
Ssu3g3270 153 Pfam Iron/zinc purple acid phosphatase-like protein C 69 129 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3270 Ssu-Chr3 89084809 89085630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3270 2 126 Miscellaneous Gene Families AT1G13900 31.111 4.40e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3270 K22390 - gmx:100815854 314.694