Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3235 ATGGAAGGTGAGGTGATCAATCTGATCAAGGTGTACCTCTCAGTCGTCATATCTCTATGCTACTGTTATTGGATCCGCAAATTTGTCCCTGCGGGAACAACAAGACTTGTCTTTGTTCTTCCCATCATCTGCTTCTACATTTTCATTCCTCTCAGCTTTTCCTCCGTACACTTGAGTGGCACCACAGGGTTCTTCCTCGCCTGGCTTGCAAACTTCAAGCTTTTGCTCTTTGCTTTCGACAAGGGACCTTTGTCCTCTGACCCACTAATCTCGCTTGCACGTTTTGTAGCCGTTGCGTGCCTTCCCATCAAGATCCAACAAAATCAACCACACACTCCCCAGATCGAATCAAGAACGTTGCATTCTTCAAACCCCAATCAACCTCATCAAAATGGTGAAAGCCCACCTCCAGAACCAGCTGATCCACCACAAGCATCCAAAAGTTCCCGTTTTGACACCGACCCATCATCTTCAATAACGCCAAATTCCAGTTTCCAAAGCAAGGGTGCTACCGGTGCCCCACTTTTACGGTATGCCATACAGGGTATTATTTTGGGCGTTTTGGTGAAAATGTATGATTACAGTGACCGTATTCATCCAATAGTGATCATGTGCATGTACTGTTTTCACATCTACTTTTTGTTGGAAATTATCTTAGCGATGGTTGCAGCAGCGGCACGAAGCACGCTGGGGTTGGAGCTGGAGCCACAGTTCAATGATCCACTGCGCTCGACCTCACTTCAAGACTTCTGGGGGAGGAGGTGGAACCTCATGGTCACCAGCATCCTGCGACCAACGGTGTACGAGCCAACACTGAGAGCCGCAGGGAATGTTGTGGGTCCCAAGTGGGCCCCACTACCAGCGGTGTTGGGAACCTTTGTTGTGTCGGGTTTGATGCATGAGCTGATACTGTTTTACATTGGGAGGTTGGAGCCCACGTTCAGGATGACGTGGTTCTTTGTCCTCCATGGAGTGTGCTTGACGGTGGAGATTGCGTTGAAGAAGGCCCTCACCGCCAGGTGCCGGTTGCCGAGGTTTGTGTCGGGACCCTTGACCGCCGGATTTGTCTTAGCCACCTGCATTTGCCTGTTCCTGCCGGAGTTCATCCGGTGTCACATTGACGTTAGGGCGTTTGAGGAATACGCTGCTTTAGGCCAGCTTCTACAAAATCTCGCTTCTGCATTCTCAGGCTTCTTTCACAGGAATATTTAG 1212 0.4967 MEGEVINLIKVYLSVVISLCYCYWIRKFVPAGTTRLVFVLPIICFYIFIPLSFSSVHLSGTTGFFLAWLANFKLLLFAFDKGPLSSDPLISLARFVAVACLPIKIQQNQPHTPQIESRTLHSSNPNQPHQNGESPPPEPADPPQASKSSRFDTDPSSSITPNSSFQSKGATGAPLLRYAIQGIILGVLVKMYDYSDRIHPIVIMCMYCFHIYFLLEIILAMVAAAARSTLGLELEPQFNDPLRSTSLQDFWGRRWNLMVTSILRPTVYEPTLRAAGNVVGPKWAPLPAVLGTFVVSGLMHELILFYIGRLEPTFRMTWFFVLHGVCLTVEIALKKALTARCRLPRFVSGPLTAGFVLATCICLFLPEFIRCHIDVRAFEEYAALGQLLQNLASAFSGFFHRNI 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3235 403 PANTHER ACYL-COA--STEROL O-ACYLTRANSFERASE 1 2 393 - -
Ssu3g3235 403 MobiDBLite consensus disorder prediction 114 129 - -
Ssu3g3235 403 PIRSF Wax_synthase 155 403 IPR017088 GO:0008374
Ssu3g3235 403 PIRSF Wax_synthase 1 128 IPR017088 GO:0008374
Ssu3g3235 403 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 2 393 IPR044851 GO:0006629|GO:0008374
Ssu3g3235 403 Pfam Membrane bound O-acyl transferase family 235 321 IPR032805 -
Ssu3g3235 403 MobiDBLite consensus disorder prediction 114 169 - -
Ssu3g3235 403 MobiDBLite consensus disorder prediction 146 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3235 Ssu-Chr3 88678990 88680201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3235 7 385 Miscellaneous Gene Families AT3G51970 46.719 2.75e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3235 - - vun:114169084 558.525