Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3232 ATGATGAGAACTCTATCTGGGCAATTTCGCTCCATCAAACGCCTAAATCCAAACCCTAAATTATCTAAATCgtcgtctcctacaaaatcagaaataaaattcaatgcCAAACCAAAATCAGATTCAGAGTCATGGTGTGTTTATCTCATCCTCTCCACCAACCATCCAATCAAAACCTACGTTGGGATTACAAACAATTTCCCTCACCGTTTGAAGCAACATAACGGCGAAATTAAAGGTGGAGCAAAGGCATCCCGTGCTGGAAGGCCTTGGATTTGTGCATGCATCATTTGTGGTTTTACAGACCGAAGTGAAGCTAGTGTATTTGAATCAAAATGGAAAGCTTTCTCAAGGAGAGCTACCCGCAAAAATCAAAACGGCAATCTCTCCAAGCAAAGTGAAGATCCATCATTACCACTGCTGCGACACAGGCAAGCAGCTTTGAATAGAGTGAGAGGTTCACTTGACTGCACTCACTTAGAAATTATTTGGCATTTGGATCCACTGTGA 510 0.3941 MMRTLSGQFRSIKRLNPNPKLSKSSSPTKSEIKFNAKPKSDSESWCVYLILSTNHPIKTYVGITNNFPHRLKQHNGEIKGGAKASRAGRPWICACIICGFTDRSEASVFESKWKAFSRRATRKNQNGNLSKQSEDPSLPLLRHRQAALNRVRGSLDCTHLEIIWHLDPL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3232 169 PANTHER EMB|CAB76036.1 18 168 - -
Ssu3g3232 169 Gene3D - 39 139 IPR035901 -
Ssu3g3232 169 SUPERFAMILY GIY-YIG endonuclease 44 119 IPR035901 -
Ssu3g3232 169 ProSiteProfiles GIY-YIG domain profile. 43 125 IPR000305 -
Ssu3g3232 169 MobiDBLite consensus disorder prediction 14 33 - -
Ssu3g3232 169 Pfam GIY-YIG catalytic domain 45 119 IPR000305 -
Ssu3g3232 169 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 18 168 - -
Ssu3g3232 169 MobiDBLite consensus disorder prediction 14 34 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3232 K15078 - gmx:100805152 304.293