Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3231 ATGGAAATTCTCTCATGTGGATCTGGACCATGCTGTCAAGTAGTGGAGTCGAAGTGGAAATTAGTTGAGAAATGGTTGAATTCACGTCAATCAAGGTTTCCCACGGTTGGAAATCGTGGAGTTTATGGTATCAATACCATTTCTAGATGCAGGTCAGTGAGATTTCATGATAATAAGGAGCAGCAAAGAAATTTTGGGTCTCTGAGTGCTCTTGAAGGGTCCAAAAGAATCAATTGCAAGGTCTATAGTGAAAGTTATGATGGCTATGTGATTGGTGGTGAAGAGGATGTAACAGATATTTCAGGGATAGAGGAGTCTGCTACTAACGTTGTCATTCCAGGTCTGCCAGATGGGTCAAATGGTGAATCTGGTGCTCCAATAAGTAGTTGCTTTTGGGAATGGAAGCCTAAACTTAACGTGCATTATGAGAAGGCAGGGTGTGAGAACGTGGATTCCCCACATGTTCTCTTTCTTCCTGGTTTTGGTGTTGGCGCTTTCCATTATGAAAAGCAGCTGAAAGATTTGGGCCGTGACACTAGAGTATGGGCACTGGATTTTCTAGGCCAAGGATTGTCCTTGCCTTTTGAAGATCCGGCTCCTCACTACAAGGAAGGTGCTACATCAAATGGAAATGCTTCTTCATGGGGCTTCGGAGATGAAACGGAACCATGGGCCGCTGAGCTTGTATACTCTATGGATTTGTGGCAAGAACAAGTTCGATACTTCATAGAAGAGGTCATCCGTGAACCAGTCTACATTGTGGGCAACTCACTAGGAGGATATGTTGCATTGTATTCTGCAGCAAGAAACCCTCATTTAGTGAAAGGTGTCACACTGCTTAATGCAACACCTTTTTGGGGGTTTCTTCCTAATCCTACAAAGAATCCAGGCCTAGCAAAATTTTTTCCATGGGCTGGAACATTTCCCTTACCTGCTAATGTAAGGAGGCTGACAGAATTGGTGTGGGAGAAAATTAGTGATCCTACAAGTATTGCTGAGGTACTTAAGCAGATTTATGCAGACCATTCAACAAATGTAGATGGTGTATTTTCACGCATAATTGAAACCACAAGGCATCCTGCAGCAGCAGCAGCGTTTGCTTCAATTATGTGTGCTCCCCAGGCAGAATTATCTTTCAGTGAAGTGTTATCTAGATGTCGACAAAACAATGTGCCAATCTGCCTCATGTACGGGAAAGAAGATCCCTGGGTGAGGCCACTTTGGGGACTCCAGGTTAAAAAGCAGGTGCCCGAAGCTCCATATTATCAAATCAGCCCTGCTGGTCACTGCCCTCATGATGAAGTCCCTGAGGTCATAAATTTCTTGCTACGTGGGTGGATCAGAAATCTAGAATCTCACGGATCTATTTCACTGCCACTGCTTGATGAGCTAGACTGTCTGAAAAACGCTGATGCCAGGGAGTTAGAATTTATCAGAGAAGGTTCAAGAAAATTAGTAACGGTGAGATTTTTCGGCTCCAGATTCTCGCTTTGGGACTGGATAAGATCTTACATCAACCCTCGCTCCAAGTTAAGAAATTTGGCAGCCAAATCTCAATGA 1560 0.4385 MEILSCGSGPCCQVVESKWKLVEKWLNSRQSRFPTVGNRGVYGINTISRCRSVRFHDNKEQQRNFGSLSALEGSKRINCKVYSESYDGYVIGGEEDVTDISGIEESATNVVIPGLPDGSNGESGAPISSCFWEWKPKLNVHYEKAGCENVDSPHVLFLPGFGVGAFHYEKQLKDLGRDTRVWALDFLGQGLSLPFEDPAPHYKEGATSNGNASSWGFGDETEPWAAELVYSMDLWQEQVRYFIEEVIREPVYIVGNSLGGYVALYSAARNPHLVKGVTLLNATPFWGFLPNPTKNPGLAKFFPWAGTFPLPANVRRLTELVWEKISDPTSIAEVLKQIYADHSTNVDGVFSRIIETTRHPAAAAAFASIMCAPQAELSFSEVLSRCRQNNVPICLMYGKEDPWVRPLWGLQVKKQVPEAPYYQISPAGHCPHDEVPEVINFLLRGWIRNLESHGSISLPLLDELDCLKNADARELEFIREGSRKLVTVRFFGSRFSLWDWIRSYINPRSKLRNLAAKSQ 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3231 519 Gene3D alpha/beta hydrolase 120 450 IPR029058 -
Ssu3g3231 519 Pfam Alpha/beta hydrolase family 155 438 IPR000073 -
Ssu3g3231 519 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 1 510 IPR044211 GO:0015996|GO:0080124
Ssu3g3231 519 SUPERFAMILY alpha/beta-Hydrolases 126 449 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3231 Ssu-Chr3 88663982 88666793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3231 - - gmx:100791985 908.286