Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3214 ATGATAAACAGACGAATTTTGAAGGATTGCTCTGCTTCAACTCCCTTTGTTAAAGTCAACGTCACCTCAAATTCTAGCTTGTCAGATGACGAGTTCGTAACGGTCACAGTCACTGGCGTTTCCAATCCTTCAGACGGTGATTGGGTTGCTATGATCTCACCTTCCAGTTCTGATGTGAAGTCTTGTCTTCTGAACGAGTTCTTCTATCTGCAAACTGGTGATACGGCCAAACTTCCTTTGCTTTGCCATTACCCTGTCAAGGCACAGTACATGAAAAACGACCCAGATTACCTCGGTTGCAAAAAGAAAGAGTGCAAGAAGTACCAAAATGGGAAATGCGCTGTGAAAACTTGCAGTGGTTCAATACAGTTTCATGTTATCAACATTAGAAGCGACATTGAGTTTGTGTTCTTCTCTGGTGGATTCCTGAAACCCTGCCTCGTGGGAAGGTCCATGCCTGTGAGCTTTGCTAATCCTAAGAGGCCACTCTATGGGCATCTCTCAAGCATTGATTCCACTGGAACATCAATGAGATTGACATGGGTTAGTGGAGACAAGGAGCCTCAGCAAATCCAATATGGAAATGGAAACACAGTTACTTCAGCAGTCACTACATTTTCACAGGATGATATGTGCAGTTCAGCACTGCCAAGTCCTGCCAAGGATTTCGGATGGCATGATCCAGGATACATCCATTCAGCACTTATGACAGGACTTAAGCCTTTAAGTACCTTCTCCTACAGATATGGAAGTGACTCTGTTGGTTGGAGTGAACAAATCCAGTTTTCAACTCCACCTGTTGGAGGATCAGATGAGGTCAGATTCATTGCATTTGGTGATATGGGCAAGACTCCTCTTGATGCTTCACAAGAGCACTACATTCAGCCAGGAGCTCTTTCCGTGATTAAGGCTATAGCCAATGATCTAAATTCCAACAATATAAATTCAGTCTTTCACATTGGAGACATAAGCTATGCAACAGGTTTTCTAGCAGAATGGGATTTCTTCCTTCACCTTATCAACCCAGTAGCTTCCAGGCTTTCTTATATGACCGCAATAGGGAACCATGAGAGGGATTATGTAGATTCTGGTTCACAGTATGATACTCCTGACTCTGGTGGGGAATGTGGAGTACCTTATGAAACATACTTTCCAATGCCAACCACAGCAAAGGATAAGCCTTGGTATTCTATTGAACAAGGAAGTGTTCATTTCACAGTAATATCAACTGAGCATGACTGGTCAGAGAATTCTGAGCAGTATGAATGGATGCAAAAGGACATGGCATCAGTTAATCGACAGAAAACTCCTTGGCTAATCTTCATGGGACATAGACCAATGTACACCTCCTACCATGGATTGTTACCTGCTGGAAACGAATTTACTGAAGCTGTGGAGCCATTGCTATTAGAAAATAAGGTTGATTTGGTTCTTTTCGGCCATGTGCATAATTATGAGAGAACTTGTTCCGTGTTTCAAAGTGAATGTAAAGCCATGccaacaaaagataaaaatggagTGGACACATATGATGGCAGAAATTACAGTGCCCCTGTGCATGCTGTCATTGGCATGGCTGGCTTCACCTTAGACCAGTTCTCAAACAATGTGGAGAGCTGGAGCCTGAAAAGGATTTCCGAGTTTGGTTATTTAAGAGCACATGCTACAAGGAAAGATTTAAACTTAGAGTTTGTCGTCTCAGATACAAGAGAAGTTAAGGACAGCTTCCACATTACAAAGTAA 1743 0.4217 MINRRILKDCSASTPFVKVNVTSNSSLSDDEFVTVTVTGVSNPSDGDWVAMISPSSSDVKSCLLNEFFYLQTGDTAKLPLLCHYPVKAQYMKNDPDYLGCKKKECKKYQNGKCAVKTCSGSIQFHVINIRSDIEFVFFSGGFLKPCLVGRSMPVSFANPKRPLYGHLSSIDSTGTSMRLTWVSGDKEPQQIQYGNGNTVTSAVTTFSQDDMCSSALPSPAKDFGWHDPGYIHSALMTGLKPLSTFSYRYGSDSVGWSEQIQFSTPPVGGSDEVRFIAFGDMGKTPLDASQEHYIQPGALSVIKAIANDLNSNNINSVFHIGDISYATGFLAEWDFFLHLINPVASRLSYMTAIGNHERDYVDSGSQYDTPDSGGECGVPYETYFPMPTTAKDKPWYSIEQGSVHFTVISTEHDWSENSEQYEWMQKDMASVNRQKTPWLIFMGHRPMYTSYHGLLPAGNEFTEAVEPLLLENKVDLVLFGHVHNYERTCSVFQSECKAMPTKDKNGVDTYDGRNYSAPVHAVIGMAGFTLDQFSNNVESWSLKRISEFGYLRAHATRKDLNLEFVVSDTREVKDSFHITK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3214 580 Pfam Calcineurin-like phosphoesterase 274 485 IPR004843 GO:0016787
Ssu3g3214 580 SUPERFAMILY Metallo-dependent phosphatases 273 572 IPR029052 -
Ssu3g3214 580 Gene3D - 162 267 - -
Ssu3g3214 580 PANTHER PURPLE ACID PHOSPHATASE-RELATED 1 580 - -
Ssu3g3214 580 CDD MPP_PAPs 272 580 IPR041792 -
Ssu3g3214 580 Gene3D - 269 580 IPR029052 -
Ssu3g3214 580 Pfam Fn3-like domain from Purple Acid Phosphatase 26 158 IPR040974 -
Ssu3g3214 580 Pfam Purple acid Phosphatase, N-terminal domain 166 264 IPR015914 GO:0003993|GO:0046872
Ssu3g3214 580 Pfam Iron/zinc purple acid phosphatase-like protein C 517 575 IPR025733 -
Ssu3g3214 580 PANTHER PURPLE ACID PHOSPHATASE 1 580 - -
Ssu3g3214 580 SUPERFAMILY Purple acid phosphatase, N-terminal domain 150 266 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3214 Ssu-Chr3 88284582 88294263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3214 31 578 Miscellaneous Gene Families AT2G03450 30.757 6.51e-70 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3214 K22390 - gmx:100775839 1115.14