Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3202 ATGGGTGAGCGTGAGATGGAAGAAAGGAAGCAATCGCGTTATGTGAAGCTGACCAAAGATCAAGCGCCTCTCGAAGATATTACCCCTGGCGAACTCAATCAGCCAATTGAGGTTCCTCAGTTGGATGTTCGCAAGTGCCCTGAATGTAGACAGCCGCTACCTGAAAGCTATGCACCTCCTGCAGATGAACCTTGGATGACTGGGATCTTTGGATGTGCTGAAGACAGAGAAAGCTGCTTGACTGGACTGTTTTGTCCTTGTGTATTATTTGGGCACAATGTAGAAAGATTGAGGGAAGACACTCCTTGGACTAGGCCATGCATTTGTCATGCCATTTGTATTGAAGGTGGCATTTCTCTGGCAATAGCAACTGTAACTGCAACTTCCATCTTTCCTGCTATTGACCCGGGGACTGTATGTCTCATTGTTGAGGGTTTATTGTTTACATGGTGGATGTGTGGCATTCACACTGGTCAAGTGCGGCAATCCTTACAGAAGAAATATCACTTGAAGAATTCACCGTGTAATGCATGTTGTGTGCACTGCTGCTTGCACTGGTGTGCCTTGTGTCAAGAACACAGGGAGATAAAGGGACGGCTCTCAGACAATATGTTTTCAGAAATGACCGTTGTAAACCCTCCTCCCATTCAAGAGATGAAATCTACCGATGACAAGGAAATTCCTGAAACGTCTTCACCTAACAACAACGAGCATACTGATTTGGAGATTCAGGCTGTATAA 741 0.4548 MGEREMEERKQSRYVKLTKDQAPLEDITPGELNQPIEVPQLDVRKCPECRQPLPESYAPPADEPWMTGIFGCAEDRESCLTGLFCPCVLFGHNVERLREDTPWTRPCICHAICIEGGISLAIATVTATSIFPAIDPGTVCLIVEGLLFTWWMCGIHTGQVRQSLQKKYHLKNSPCNACCVHCCLHWCALCQEHREIKGRLSDNMFSEMTVVNPPPIQEMKSTDDKEIPETSSPNNNEHTDLEIQAV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3202 246 MobiDBLite consensus disorder prediction 1 20 - -
Ssu3g3202 246 PANTHER DUF614 FAMILY PROTEIN-RELATED 11 230 IPR006461 -
Ssu3g3202 246 MobiDBLite consensus disorder prediction 232 246 - -
Ssu3g3202 246 PANTHER PLAC8 FAMILY PROTEIN 11 230 - -
Ssu3g3202 246 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 64 197 IPR006461 -
Ssu3g3202 246 MobiDBLite consensus disorder prediction 211 246 - -
Ssu3g3202 246 Pfam PLAC8 family 65 195 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3202 Ssu-Chr3 88158686 88161787 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3202 - - gmx:100499924 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3202 3 88158686 88161787 Ssu3g3202 3 88158686 88161787 ECH