Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3199 ATGTCACCAGTGTTGGTGAATATCTTCTTACTTTACCCCAACAATTGGAGCCACTTGCTGAGGGAATTTCTAACAATGAAATCAATGATGAAGCGCAGTTCTTTGCAACTGAATGGATGTTTAAGgTTGCAGAAGGGTGCAACTGCACTTTACATAGAGCAGTTGCGTGGGATTCAGTACATTTCAGATCGTGGAGCACAGCAGCTATCAGTTGATATTGAGTATCTTAGTAATGTGCTTTCTGCTCTGTCAATGCCAATTCCTCCAGTTCTGGTTACATTCCAAAGTTGTCTTTCTACTCCAAGAAACCAGCTGAAAGATCTTTTAAAGACAGATTCAGCAAACCAACTTGATCTGCCAACAGCAAACCTTGTCTGTAAGATGCGGCGAGTGAATTTGGATTCGTGA 408 0.4142 MSPVLVNIFLLYPNNWSHLLREFLTMKSMMKRSSLQLNGCLRLQKGATALYIEQLRGIQYISDRGAQQLSVDIEYLSNVLSALSMPIPPVLVTFQSCLSTPRNQLKDLLKTDSANQLDLPTANLVCKMRRVNLDS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3199 135 Pfam Golgi complex component 7 (COG7) 45 130 IPR019335 GO:0006886|GO:0017119
Ssu3g3199 135 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 45 129 IPR019335 GO:0006886|GO:0017119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3199 K20294 - gmx:100796129 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3199 3 88129132 88130245 Ssu3g3199 3 88129132 88130245 ECH