Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3196 ATGGGTTCGGAACCAGAAGTGGTGGCTCAGAGAAGTTGTGGCAAGCTCATTGGGACTCGGGTCCTACAGTACTTAAATGGAGGTCCTCTCTCCTTCAAAACCCACCAAGCCATCGTTCTGATTGTAACATTTTTTGCTTATGCTAGTTATCATGCCACGAGAAAAACCACAAGTATTGTAAAGAATGTCCTTGATCCGCAATCAGCAGATACAAGCTTGACCTTCTTTCGATTAAGGCCAACCAATTTCACTGAGTCAAATGGATCAAGGAGACTTTCTTCCAACCTTGGAGATGGTTGGGCACCATTTAATGGATCAGATGGTACATCCCTTCTTGGTGAATTGGATGTTGCTTTTCTTGCAGTGTATGCTTTTGGGATGTACTTTTCTGGACATTTAGGTGACCGGTGTAATTTGAGGATTTTTCTGACAGTTGGGATGCTAGGAACTGGCTTGTTTACTTCACTGTTTGGGGTAGGGTACTGGGGAAACATCCACAACTTCTActattatttagtagttcaaaTGATTGCTGGATTGTTTCAATCCACTGGATGGCCgtctgttgttgctgttgtgggTAACTGGTTTGGGAAGAGCAAGAGAGGGTTGATCATGGGAATTTGGAATGCTCACACTTCAGTTGGGAACATTGCTGGTTCTTTGATTGCTTCTGCTATGTTGAGCTATGGATGGGGTTGGTCCTTTGTTGTGCCAGGACTAATAACTGCTTTCATCGGTTTGGTGGTTTTCCTTATATTGCCAGTCACACCTGAGTCTGTAGGAGCTGGTAGAGAGGAAGATGAATGCGGTAGTCCCAAGAAAAGTGGAGAAGAAGCGGCAGAGCCTCTGTTAAGGCAAGAAACTCCAGTTGAGGAGAAAGCAGTTGGATTCATAGAGGCATGGAAAATTCCTGGGGTTGCTCCTTTTGCTTTCTGTCTGTTTTTTGCCAAATTGGTTGCATATACATTTCTCTATTGGCTCCCATTCTATGTTAGCCACACAGCAATTGACGGGAAATATCTATCTAGTGGGACATCAGGAACTCTATCCACTTTATTTGACGTTGGAGGGGTGCTGGGTGGAATTCTAGCCGGCCACATTTCTGATCACTTAAATGCTAGAGCCATAACAGCAGCAAGTTTCATGTACTGTGCAATCCCTGCTCTCTTCTTCTATCGAAGTTATGGGCACATTTCGTTGATTCTAAATGGAGTATTGATGTTCATCACTGGCATGTTCGTGAACGGGCCTTATGCTCTTATAACTACTGCAGTTTCAGCTGACCTGGGAACACATAAATCGTTGAATGGTAATTCACGAGCTCTGGCAACTGTCACGGCAATCATTGATGGAACTGGTTCTATAGGGGCTGCAGTTGGACCTTTATTAACAGGCTACATATCTGCAAAGAGCTGGAGTGCTGTTTTCACAATGTTGATGGTAGCAGCTTTAATTGCAGGGCTGCTTTTGACCAGGCTAGTAGTGTCTGAGGTGGCCACAAAGATTGAAGAGTCAAGGTCTAATAGAGCACCGGAATGTTCACTTGAAGTATAA 1557 0.431 MGSEPEVVAQRSCGKLIGTRVLQYLNGGPLSFKTHQAIVLIVTFFAYASYHATRKTTSIVKNVLDPQSADTSLTFFRLRPTNFTESNGSRRLSSNLGDGWAPFNGSDGTSLLGELDVAFLAVYAFGMYFSGHLGDRCNLRIFLTVGMLGTGLFTSLFGVGYWGNIHNFYYYLVVQMIAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSVGNIAGSLIASAMLSYGWGWSFVVPGLITAFIGLVVFLILPVTPESVGAGREEDECGSPKKSGEEAAEPLLRQETPVEEKAVGFIEAWKIPGVAPFAFCLFFAKLVAYTFLYWLPFYVSHTAIDGKYLSSGTSGTLSTLFDVGGVLGGILAGHISDHLNARAITAASFMYCAIPALFFYRSYGHISLILNGVLMFITGMFVNGPYALITTAVSADLGTHKSLNGNSRALATVTAIIDGTGSIGAAVGPLLTGYISAKSWSAVFTMLMVAALIAGLLLTRLVVSEVATKIEESRSNRAPECSLEV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3196 518 PIRSF Hexose_phosphate_transp 29 512 IPR000849 GO:0016021|GO:0022857|GO:0055085
Ssu3g3196 518 Pfam Major Facilitator Superfamily 112 430 IPR011701 GO:0022857|GO:0055085
Ssu3g3196 518 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 1 510 - -
Ssu3g3196 518 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 1-RELATED 1 510 - -
Ssu3g3196 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 500 IPR020846 GO:0022857
Ssu3g3196 518 Gene3D MFS general substrate transporter like domains 30 267 IPR036259 -
Ssu3g3196 518 Gene3D MFS general substrate transporter like domains 301 509 IPR036259 -
Ssu3g3196 518 SUPERFAMILY MFS general substrate transporter 109 495 IPR036259 -
Ssu3g3196 518 CDD MFS_SLC37A1_2 36 498 IPR044740 GO:0061513
Ssu3g3196 518 MobiDBLite consensus disorder prediction 262 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3196 Ssu-Chr3 88106188 88107911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3196 1 514 Organic Solute Cotransporters AT3G47420 72.832 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3196 K13783 - gmx:100799211 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3196 3 88106188 88107911 Ssu3g3196 3 88106188 88107911 ECH