Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3195 ATGGCTACTGCTGCAGTTATTGGACTGAGTGGAGGAAAGAGGCTCTTGAGTTCATCTTACCATTACTCTGATATTATAGAAAAGCTTTCTTCTGGCAGTGACTTTGCATCCACACACTATCAGATTGCTCCTACAAAATCTGTAATAGTTGCCAAGAAGTCATCCAACTACACTCCAACTTTTCCAGCATCCAATAGGCAGAATCAGTCCATTAAGGCTCTTAAGGAGCACGTTGATGGTGCCCCTACCATTGCGGATCCATGGTTTCAGAGTTACAATTCTAATGACTTAGAGGTGCAAAGCTCTGAAATGGGTTATTCTGTGGAGGCTCTTCTTTTGCTGCAGAAGTCAATGCTGGAAAAGCAATGGAACCTTTCCTTTGAGAGGGAAGTGCTAACCGAACATTCGAGTAAAGAAAAAACTGCAGGAAAGTGGCAGTGA 441 0.4308 MATAAVIGLSGGKRLLSSSYHYSDIIEKLSSGSDFASTHYQIAPTKSVIVAKKSSNYTPTFPASNRQNQSIKALKEHVDGAPTIADPWFQSYNSNDLEVQSSEMGYSVEALLLLQKSMLEKQWNLSFEREVLTEHSSKEKTAGKWQ 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3195 146 PANTHER RNA POLYMERASE SIGMA FACTOR SIGA 1 139 - -
Ssu3g3195 146 PANTHER RNA POLYMERASE SIGMA FACTOR RPO 1 139 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3195 K03086 - gmx:100801884 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3195 3 88096022 88096462 Ssu3g3195 3 88096022 88096462 ECH