Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3189 ATGGCAAGGTCAGTGGTGGGGTCCTTACCCCTCTTTTCTGGCCCATACAATGCCAATAACAATGCGCTAATCAAACCCCTCCACTTGTCCTTCTCCGCCCGCCACGTCACCTCCTCCGCCGTGGCCACCATGCCCCCTgccgccgccgccaccaccaccacccatCCCTCCTTCGAAATCCTCGGCGGCGCACGTGACCGTTTCCTCCCAGCTCTCTCCCACTTGTCTCGCCCCTACCGCCCTTTCCCCCTGCTCGCCGGCAACCGCCACCTCGAAACCATCTTCGCCGCCTTCTTCCGCTCAGTCCCCAACGTCAGGCTCCAGCGCGAGTGCCTCAGAACCCATGACGGCGGAGCCGTCGCCCTCGACTGGGTCTCCGGCGACGACCGCCGTTTGCCCCCCGATTCTCCAGTCCTCATTTTGCTGCCAGGCTTAACCGGAGGTAGTGAGGATGCGTACGTGAGACACATGTTGGTTAGAGCTCGAAGTAAAGGGTGGCGTGTTGTGGTGTTCAACAGTCGCGGTTGTGGAGACAGCCCTGTTACTACTCCTCAGTTCTATTCGGCTTCGTTTTTAGGAGACATGCGTGAGGTTGTTTCCCATGTCACTGCTAGATACCCCAATGCGAATGTATATGCTGTTGGATGGTCTCTTGGGGCCAACATTCTCGTTCGTTACTTGGGTCAGGAATCGCACAATTGTCCTCTTTCTGGCGCTGTATCACTGTGTAATCCTTTCAATTTGGTTGTGGCAGATGAGGACTTCCGAAAGGGctttaacattatttatgaCAAGGCCCTTTCAAAGGCTCTTTGCAAGATTTTCAAGAAGCACGCTTTACTCTTTGAGGATCTTGGTCGTGAGTATAACATTCCAATGGCAGCCAATGCCAAGTCTGTTAGGGAGTTTGATGATGGACTGACACGTGTTTCTTTTGGATTCAAGTCTGTGGATGAATACTACTCTAATTCAAGCAGTTCAGATTccataaaacatgttaaaaccCCTTTGCTTTGCATCCAgGCAGCCAATGATCCGATTGCTCCTAATAGGGGAATTCCTCGTGAAGATATCAAGGAAAATCCAAACTGCTTGTTAGTAGTGACACCCAACGGTGGCCATCTAGGGTGGGTTGCTGGTGATGAATCTCCACTGGGAGCCCCTTGGACTGATCCTTTGGTAATggattttattcaatatttagagagagaagaagtAAAGGCTCCAGAAACTTGTAGCAATCCAGGAAGTAAAGAGGCGTTGTACCATCTTGAAGTGTAA 1281 0.4832 MARSVVGSLPLFSGPYNANNNALIKPLHLSFSARHVTSSAVATMPPAAAATTTTHPSFEILGGARDRFLPALSHLSRPYRPFPLLAGNRHLETIFAAFFRSVPNVRLQRECLRTHDGGAVALDWVSGDDRRLPPDSPVLILLPGLTGGSEDAYVRHMLVRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMREVVSHVTARYPNANVYAVGWSLGANILVRYLGQESHNCPLSGAVSLCNPFNLVVADEDFRKGFNIIYDKALSKALCKIFKKHALLFEDLGREYNIPMAANAKSVREFDDGLTRVSFGFKSVDEYYSNSSSSDSIKHVKTPLLCIQAANDPIAPNRGIPREDIKENPNCLLVVTPNGGHLGWVAGDESPLGAPWTDPLVMDFIQYLEREEVKAPETCSNPGSKEALYHLEV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3189 426 Gene3D alpha/beta hydrolase 102 401 IPR029058 -
Ssu3g3189 426 SUPERFAMILY alpha/beta-Hydrolases 100 384 IPR029058 -
Ssu3g3189 426 ProSitePatterns Uncharacterized protein family UPF0017 signature. 304 345 IPR000952 -
Ssu3g3189 426 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 39 408 - -
Ssu3g3189 426 Pfam alpha/beta hydrolase fold 137 375 IPR000073 -
Ssu3g3189 426 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 39 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3189 Ssu-Chr3 88041939 88044893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3189 108 402 Miscellaneous Gene Families AT2G03140 32.660 7.72e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3189 - - gmx:100809859 733.791