Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3187 ATGAAACCACAAAGCAATGGGGTGTCTAGAGCTCATAAGGCAAATAATACTCCTCAAATTGAAGGGCCTAACTGGCTTATTTTTGCTGCTGGTGCTTTGTTGAGTACCTTATCCATTCGCCTTGGTTACAAGTTGAAGCAGGCACTTGACTCAAAGCCGAAGCAGACTGCAACTACTGTTCAGAAAGGTCCTTATGTACTGTTAGGGGGACACCGGTTTTCCTGTTTTGTATTTCTCCTCCCTTTTTATGAATTCTTTATCTATCCAAAATgggaaaataaatgtaatagtCAAAAATGTTCAGTGTCTTTGTCTACAGTGGATTCTAACTTCATATTGTTTGTTACTACAGGAAATGGAAAATCCTCCAACACAAAGAATTCTGCAGACTGCTTTATGCAGGCTGATGGATATTCCCAAACGCAAGATAATCACAGATGCTTCAGTTGCATTTCAGGAATTGGAGGTACCATGGAGTTAAAGTGCCCACCAAACAGCCAGATGCAGATGCTGAATGAGTTTGATGGGGCTCTCCCTTTGGTGACTGTTCCTACTGCTGCTGAATTTAGCAAGGAAAATGGTGTTGTCTGGGCATGCTCTCCTGATCATCTTGAATTGCCTTCAAAGCCATTCCACCATTCAAACTGCTCAGATTCACCATGTGTATCAGAATCTGGTTCTGATATTTTTAGTAAGCGGGAAGTCATACAGAAACTGCGGCAACAATTGAAGAGAAGAGATGATATGATACTAGAAATGCAAGATCAAATGGCTGAATTGCAAAATTCACTCAATGCTCAGATGGGGCTTTCTTCTCATTTGCAATTGCAACTTGATGCTACAAACAGGGACTTATTTGACTCCGAGAGAGAGATCCAACGGCTAAGGAAAGCAATTGCAGATCACTGTGTTGGACATGTTCCCCGTGACAAATCTTCCAAGGTTACAGCGTTACCTGCTGAGATTAGAAATGGCCTTTCAAATGGGCATCTTGATGGGGAGAGTAATTCTGATTCCCCCGAAAAACTAAGGGATGAGGAGGAGAGAATTGAGATGCTGAAAAGGCAAGTAGGAGAGTTGAAAGAGGTAATAGAAGGAAAAGATTACTTGCTCCAAAGCTACAAGGAGCAGAAGGCGGAACTCTCTGTGAAGATCAGGGAATTGCAGCAGAGATTGGATTCTCAGCTACCTAATATTTTGTAG 1203 0.4148 MKPQSNGVSRAHKANNTPQIEGPNWLIFAAGALLSTLSIRLGYKLKQALDSKPKQTATTVQKGPYVLLGGHRFSCFVFLLPFYEFFIYPKWENKCNSQKCSVSLSTVDSNFILFVTTGNGKSSNTKNSADCFMQADGYSQTQDNHRCFSCISGIGGTMELKCPPNSQMQMLNEFDGALPLVTVPTAAEFSKENGVVWACSPDHLELPSKPFHHSNCSDSPCVSESGSDIFSKREVIQKLRQQLKRRDDMILEMQDQMAELQNSLNAQMGLSSHLQLQLDATNRDLFDSEREIQRLRKAIADHCVGHVPRDKSSKVTALPAEIRNGLSNGHLDGESNSDSPEKLRDEEERIEMLKRQVGELKEVIEGKDYLLQSYKEQKAELSVKIRELQQRLDSQLPNIL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3187 400 Coils Coil 236 256 - -
Ssu3g3187 400 PANTHER OS05G0587400 PROTEIN 116 400 - -
Ssu3g3187 400 Coils Coil 278 298 - -
Ssu3g3187 400 PANTHER OS05G0587400 PROTEIN 116 400 - -
Ssu3g3187 400 Coils Coil 343 363 - -
Ssu3g3187 400 PANTHER OS05G0587400 PROTEIN 1 59 - -
Ssu3g3187 400 Coils Coil 371 391 - -
Ssu3g3187 400 PANTHER OS05G0587400 PROTEIN 1 59 - -
Ssu3g3187 400 MobiDBLite consensus disorder prediction 324 345 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3187 - - ccaj:109798953 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3187 3 88015866 88018095 Ssu3g3187 3 88015866 88018095 ECH