Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3184 ATGTTGAGCGGTGGGTGGCCTTCCCATCCCGTGAGTGTGGGAAACATGGCCACGGTGGCGAGGATCCCAACCATCTCCCCAGTGTCATGCATCCAGACGTTTCGTACCCAATCCCCTCAACTACCAGCCACTTTCATCAGGACCCGGGTCGGACCCGGGTCACGGGGTCCCATTCGGGCATCGACAGCAGGCACAGAGAGAGGGGAGATGGTGTTGGAGCAACACCCGAAGGAGGAAAAGCAACTGCAGATGGGAATCGCTGAGTTCTACGACGAGTCGTCTGGCATATGGGAGGACATTTGGGGCGACCACATGCACCACGGCTTCTACGAACCGGATTCCACCGTTTCTGTTTTGGATCACCGCGCTGCTCAGATCCGAATGATACAAGAGTCTCTTCGTTTTGCCTCTGTttctgAGGACCGTACTAAATGGCCCAAGAGTATAATTGATGTTGGGTGTGGCATAGGGGGCAGCTCCAGATACCTGGCCAAGAAATTTGGGGCAACGAGTGTAGGCATTACTCTGAGTCCTGTTCAAGCTGAAAGAGCAAATGCTCTTGCTGCTGCTCAAGGATTGGCTGACAAGGTTTCTTTTCAGGTTGCTGACGCTCTAGAGCAACCATTCCCGGACGGGCAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAGCAAAGTTTGTTGGAGAGTTAGCTCGGGTAGCAGCACCAGGTGCCAccataataatagtaacatgGTGCCACAGGGATCTTGGCCCTGCTGAAGAATCCCTACATCCGTGGGAGAAAGATCTCTTGAACAGGATTTGCGATGTATATTACCTCCCAGCCTGGTGCTCAGCTGCTGATTATGTCAAATTGCTCCAATCCCTGTCACTTCAGGACATCAAGTCAGAAGATTGGTCTCGCTTTGTTGCTCCATTTTGGCCAGCAGTGATACGCTCCGCGTTGACATGGAAGGGTCTCACTTCACTCTTCAGCAGTGGACCAAAAACCATAAAAGGAGCTTTGGCTATGCCATTGATGATAGAAGGATACAAGAAGAATCTAATAAAGTTTGCCGTCATCGCATGTCGAAAACCTGAATAA 1104 0.5054 MLSGGWPSHPVSVGNMATVARIPTISPVSCIQTFRTQSPQLPATFIRTRVGPGSRGPIRASTAGTERGEMVLEQHPKEEKQLQMGIAEFYDESSGIWEDIWGDHMHHGFYEPDSTVSVLDHRAAQIRMIQESLRFASVSEDRTKWPKSIIDVGCGIGGSSRYLAKKFGATSVGITLSPVQAERANALAAAQGLADKVSFQVADALEQPFPDGQFDLVWSMESGEHMPDKAKFVGELARVAAPGATIIIVTWCHRDLGPAEESLHPWEKDLLNRICDVYYLPAWCSAADYVKLLQSLSLQDIKSEDWSRFVAPFWPAVIRSALTWKGLTSLFSSGPKTIKGALAMPLMIEGYKKNLIKFAVIACRKPE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3184 367 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 68 367 IPR025774 GO:0008168|GO:0032259
Ssu3g3184 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 85 366 IPR029063 -
Ssu3g3184 367 Pfam Methyltransferase domain 151 248 IPR013216 GO:0008168
Ssu3g3184 367 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 71 361 - -
Ssu3g3184 367 Gene3D Vaccinia Virus protein VP39 91 339 IPR029063 -
Ssu3g3184 367 CDD AdoMet_MTases 149 251 - -
Ssu3g3184 367 PANTHER METHYLTRANSFERASE 71 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3184 Ssu-Chr3 87990808 87993964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3184 147 305 Acyl Lipid Metabolism Gene Families AT3G18000 30.818 1.33e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3184 K05928 - gmx:732543 595.89