Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3178 ATGGGTTGGGTAAGGGGAATGATGGAAGGGGTGACGGTGGTGGGATGTCTGTGTTTACTGGGTTGGGCGGGTCTGTGGTTCTTGAACCGTCGCCTCTACAAAGAGTACGAAGAGAAACGCGTCCTCGTCCAAATCATCTTCAGCGTCGTCTTCGCCTTCTCCTGCAATCTTCTCCAGCTTGTCCTCTTCGAAATCATTCCCATCCTCTCCAAAGAGGCACGAGTGGTGAACTGGAAGGTCGACTTGTTCTGTTTGATCTTGTTGCTCGTCTTCCTCCTCCCCTATTACCATTGTTACTTGATGCTCAAAAACAACGGCGTCAGGGCCGAGAGGGCTGCGCTTGGTGCCATTCTCTTCTTGTTCGCTTTTCTCTACGCCTTTTGGCGCATGGGCATTCACTTTCCAATGCCATCACCTGATAAAGGTTTCTTCACCATGCCTCAACTGGTGAGTAGGATTGGGGTTATCGGTGTTACTGTCATGGCTGTTCTATCTGGTTTTGGGGCCGTAAACCTGCCATACAGTTATTTATCACTTTTCATCAGAGAGATTGAGGAAACAGAAATCAAGGCCTTGGAAAGACAGCTAATGCAATCAATTGAGACTTGtatatcaaagaaaaagaaaattattctttGCCAAAGGGAGATGGAGCACAAGCAAGGATCTGAAGAGAAGTTAAGTGCTAGATCTTTAATTAAACGAATTGTTGGTACGGTTGTTCGATCTGTGCAAGAGGATCAAAAAGAGCAAGATATTAAAGGCTTGGAAGCAGAAGTTCTGGCCTTAGAAGAGCTTTCAAAGCAATTGTTCTTGGAGATCTATGAGCTTCGTCAAGCAAAGGATGCTGCTGCTTATTCTCGAACTTGGAGAGGACACATGCAGAATCTACTTGGCTATGCTTGTTCTGTATATTGTGTGTATAAAATGATCAAGTCATTGCAAAGTGTTGTTTTCAAACAGGATGGTTCAGTTGATCCCGTGACAAGGATAATAAGTATATTCCTTCAGTTCTTTGATATAGGAATAAATGCAGCCTTATTATCACAGTACATTTCCTTGCTATTCATTGGAATGTTGGTTGTGATATCAGTGCGTGGATTCTTAACAAATCTAATGAAGGTATTCCTGCTGCTTTCAATTgctaattttttccatttaatgtTGCTTGGATTAGTTATACTAGTGTTAAACAACCTCTTGAGGAGTGTTCTTGATAATATTACAATTGGCTTTCATCCTCTTTTGTTGGGGGTGGGCCAATTGGGCCGTTGA 1275 0.4204 MGWVRGMMEGVTVVGCLCLLGWAGLWFLNRRLYKEYEEKRVLVQIIFSVVFAFSCNLLQLVLFEIIPILSKEARVVNWKVDLFCLILLLVFLLPYYHCYLMLKNNGVRAERAALGAILFLFAFLYAFWRMGIHFPMPSPDKGFFTMPQLVSRIGVIGVTVMAVLSGFGAVNLPYSYLSLFIREIEETEIKALERQLMQSIETCISKKKKIILCQREMEHKQGSEEKLSARSLIKRIVGTVVRSVQEDQKEQDIKGLEAEVLALEELSKQLFLEIYELRQAKDAAAYSRTWRGHMQNLLGYACSVYCVYKMIKSLQSVVFKQDGSVDPVTRIISIFLQFFDIGINAALLSQYISLLFIGMLVVISVRGFLTNLMKVFLLLSIANFFHLMLLGLVILVLNNLLRSVLDNITIGFHPLLLGVGQLGR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3178 424 Pfam Abscisic acid G-protein coupled receptor 286 383 IPR025969 -
Ssu3g3178 424 Pfam The Golgi pH Regulator (GPHR) Family N-terminal 143 209 IPR022535 GO:0016020
Ssu3g3178 424 PANTHER G-PROTEIN COUPLED RECEPTOR 89-RELATED 1 381 IPR015672 -
Ssu3g3178 424 Coils Coil 182 202 - -
Ssu3g3178 424 Coils Coil 246 273 - -
Ssu3g3178 424 PANTHER GPCR-TYPE G PROTEIN 2 1 381 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3178 - - gmx:100814132 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3178 3 87866969 87874120 Ssu3g3178 3 87866969 87874120 ECH