Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3162 ATGTACCTGAAGAAGCAGTTATGGAGTGAAACAGGGAAAGGGGATGGAAGTGCGAAGACAGAGGATTATGGTGGAGTGGGTGAGGTGGTGAAGTCACTGCAGCAGCAGAGAGTGTACAGAGAAGTTACTCTTGCGCTCAGAACGGGCCTCAGAGACGCGCGTGCCGAGTTCTCCTTTCTCCGTGTCCGCGCTCTCCGTTCCATTCTCAAGTTCCTCCGTTCCGTTGCCGAGTCCGACTCAACCATTGACCTCTTTAGCCAAACCCAGTCCATTCCCCAACTCCAAgTGGTTCCGGTTCTGTTTCAGCACTCGCTCAAAGAGAGTGGGGATGATTACAGTGAGAATAGGGTAGTAGTAGGAGATTTGAGTCATATATTTGGTGTCGAACCCATGAAGTTGACGAGTCCATCCACTGATGCTGAAGTTGCGCTTGCTCTTAGAGTCTTGGAAGGTTGTTGTTTACTTCACCCTCAGAGTACGGCTCTTGCCCATCAACACAACGCTATTCAGGTTTTAATGAACATATTATCCACTCGTGGAGTACTTGAGCAAGGTGCATGCTTGGATGCTCTAATCTCATTGATGGTGGattcatcatccaatcaaaTGGATTTTGAGAAATGTAATGGTATTATGGAAGTTGCTGATCTGCTAAGAGACAAACAAGTGGATGAAAATCTAAGGTTAAAATGTGGAGAGTTTTTGCTGCTGCTCATTGGACATGTCGATGGAAGAGATAAGCCTCCTTTGGCAACTATACATGAAGATACAAGGCGTCTTCTGGGGGAGAAATCAGCCTCCTTGATATGGGCAGCCAGTCAGTTTGGCTCAACACTGGATCCAGAGCAGAGACTAACAGCTCTCCAGATCCAGGCTCGCAGGGTCCTTGAATCATTGGACTTGTACTGA 909 0.4675 MYLKKQLWSETGKGDGSAKTEDYGGVGEVVKSLQQQRVYREVTLALRTGLRDARAEFSFLRVRALRSILKFLRSVAESDSTIDLFSQTQSIPQLQVVPVLFQHSLKESGDDYSENRVVVGDLSHIFGVEPMKLTSPSTDAEVALALRVLEGCCLLHPQSTALAHQHNAIQVLMNILSTRGVLEQGACLDALISLMVDSSSNQMDFEKCNGIMEVADLLRDKQVDENLRLKCGEFLLLLIGHVDGRDKPPLATIHEDTRRLLGEKSASLIWAASQFGSTLDPEQRLTALQIQARRVLESLDLY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3162 302 PANTHER CELL DIVISION CONTROL PROTEIN 14 1 300 - -
Ssu3g3162 302 Gene3D - 131 251 IPR011989 -
Ssu3g3162 302 SUPERFAMILY ARM repeat 50 272 IPR016024 -
Ssu3g3162 302 Pfam Cell division control protein 14, SIN component 137 236 IPR012535 -
Ssu3g3162 302 PANTHER CELL DIVISION CONTROL PROTEIN 14 1 300 IPR012535 -
Ssu3g3162 302 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3162 Ssu-Chr3 87663672 87666942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3162 - - pvu:PHAVU_011G018800g 540.421