Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3151 ATGTTTGGCCAACTTGAGCATGAGCTAGAGCTGCACGTGCCGGCGATTGAGGCATGGGATCTGTTTGGTACCCTTCGAATAGGAAAACTTGTTGCCCAAGAGCTGCCGGAATTGTTTCAAAAGGTGGAGCTAACCGAAGGAGATGGAGGGGTTGGCACTGTCCTCAAACTAACTTTTGCTCCAGGTGTACCTGGGCCAGCTGGTTACAAAGAGAAGTTCACTAAGATTGATAATGAGAAACGCATCAAAGAAACAGAGGTAGTTGAAGGAGGGTACTTGGAGTTAGGATTCACTCTATTTAGAGTTCGTTTTGAAGTAATAGAGAAAGGTGAAGAGTCGAGCATAATCAAATCTACAATCGAGTATGAAGTCAAGGAAGAGAACGCCGCCAATGCCTCACTTGTTTCTATCCAGCCAGTGGCAACCATTGCTGAACTTGCCAAGAATTacctcaacaacaacaaggcTGCAAAAGAAGCAAAGTAG 486 0.4342 MFGQLEHELELHVPAIEAWDLFGTLRIGKLVAQELPELFQKVELTEGDGGVGTVLKLTFAPGVPGPAGYKEKFTKIDNEKRIKETEVVEGGYLELGFTLFRVRFEVIEKGEESSIIKSTIEYEVKEENAANASLVSIQPVATIAELAKNYLNNNKAAKEAK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3151 161 CDD Bet_v1-like 3 128 - -
Ssu3g3151 161 Pfam Pathogenesis-related protein Bet v 1 family 3 132 IPR000916 GO:0006952
Ssu3g3151 161 PANTHER S-NORCOCLAURINE SYNTHASE 2-LIKE 3 156 - -
Ssu3g3151 161 SUPERFAMILY Bet v1-like 3 135 - -
Ssu3g3151 161 PANTHER - 3 156 - -
Ssu3g3151 161 Gene3D - 1 156 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3151 Ssu-Chr3 87554349 87555635 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3151 - - gmx:100305838 272.322