Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3146 ATGGCTGATGACTTGGGTAAAGGAATTGAAAATGGTTCTTTGAATTCAACGGAAGTAGAGAAGCCTCAGATTGAGCCCATAAGGCTGCCTACAGTGGAGGAAATCCGTGGTCAAGACATTTGGAACAATTGTGCAATGCGCAGTGTCGTTAGTGGAGTCATGGGGGGCGGGCTTGGCATCTTCATGGGTTTATTTCTTGGAGCTCTGGACAACCCACTGATGCAGGAGGAAATGACTGGCAGACAACAGCTCATATATCAAGCAAAGCAGATGGGGCGAAGGAGTTGGAGTTCTGCCAAAGCATTTGCTGTTATGGGTTTAATATTCTCAGCTGCTGAGTGTGTTGTTGAGAAGGCTCGAGCAAAACATGACACAAAAAATACTGTTGTTGCTGGATGTGTAACTGGTGGTGCAATATCAGCAAAAGGTGGCCCAAAAGCAGCGTGTGCTGGTTGTGCTGGCTTTGCAGCATTCTCCGTCGTAATAGAGAAGTTTTTGGAGAGACATCAGTAA 513 0.4639 MADDLGKGIENGSLNSTEVEKPQIEPIRLPTVEEIRGQDIWNNCAMRSVVSGVMGGGLGIFMGLFLGALDNPLMQEEMTGRQQLIYQAKQMGRRSWSSAKAFAVMGLIFSAAECVVEKARAKHDTKNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVVIEKFLERHQ 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3146 170 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 17 169 - -
Ssu3g3146 170 MobiDBLite consensus disorder prediction 1 22 - -
Ssu3g3146 170 Pfam Tim17/Tim22/Tim23/Pmp24 family 44 159 - -
Ssu3g3146 170 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 17 169 IPR039175 GO:0042721|GO:0045039
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3146 98 169 Miscellaneous Gene Families AT4G26670 41.667 5.64e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3146 K17790 - gmx:100795602 273.092