Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3120 ATGGATTTCCACGCCCTCTCAAGGAAGCAGCTCCAGACCCTCTGCAAGAAGAACAAGATTCCTGCCAACATCACCAACGTAGCCATGGCTGACGCTCTTGCTGCTCTCAACCAAGTTGAAGGATTGGATGAATTTTTGAATCCAACAGATGGTGATGCTGGAACCCCAAGTGTTCATCACCGTACGGCTGGTAGAGCCTCAACTCAAAGGAAAGGAGCGAGAGAAGAAGCAGAAGGTTCAAAGGTGAAGGTCTCTACCAGGCCTCAACGTGGGGCTAGAGCAGCAGAAGGAGTAGTTGAGCAAGAGAACAAAGATGCCAATGTCCCAGTCACTCCTGCTGCAGCCAGTAGGAGAAGGGCTACTGCGGTTTCTACTCGCAGAAAGAAAGAAGTTGAGATGGTAGTACAAGATGCTGATAATAAGAATGAGGTTCAGGGAAAGCCAAAGCCCGCAGATGTGCCTAAAACACCTGCCGTAGCTCCAGTCAGTAGGACAAGAGCTACTGGCCGTTCGGTTTGCACCACCAAAATTGAGACCCCCGCTGGTACTTCAGCGCAGAGAGCATATAGCACCAGGAGGTCTGTTAGATTGTTGGAGAAGGACTTGTCTAAGATGAGCTTGATGGACACTGATGACACGGGACTTGAGCTGGAAGTTTGCTCTTCAGAAAATAACACAGAATATGAATGCCAATCACATGATTCAGGTTCAGATGTGAAACTAGTTTCTGTGACAGAAAATGTTATGGTGGTTGAACCACATGGTTCAAAGGAAGATGAACAAGAGAAAGTCAATTGCTTGGAGTTGGAGGCTGAACCGCATGGTTCAGATGAAGCAgATATCGCTGCTGTGAGTGTCGTGGTATCTGATGACGTTTCTGTTGATGTTACCGATCAAGATGTTGGTGGCTCATTCCCTATGCTAGCCGAGTGCAACATGGATGATCAAGTCAGCAATGAGGTTGATGATAAAGAAGATAAGAACAATGATCAAGATGTTAATGATGCTTCAGTGAGCCTAAAGGAATTAGTTGAGTGCAACATGGATGATCAAGTCAGCAATGAGGGTGATGATAAAGAAGATAAGAATAATGTGCCAGCAGAAGAGGCTGAACTACATGATTCAAATTTGATACTGGAAGGAAGTTATGACACATGTGACAAATCCAATGATGCAGATGCTCTTACGGAGGTTACTGGCCAAGATACTGCAACTTTGACTGTTGTGGTGCCTGATGATGTTTCTGATCAAGAAGTTGCTGGCTGGCTTCCTATGTCACCTGTTAATGATGCTCCAGTGAACATTAAGGAATTTGTTGAGTGCAACATTGATGATGATCAAGGCAATTACATGGCGGATGAATACTACCAGCATCCTCTTAATATTGATGAAAAGGCTGCTGATGAAAGTGAGTTGATGACAGATTCTGAAGGGATTCTTGAGCTGGAGTCAATTTCTCATTCTGCTGTTAAAAATGTCACTATTGAATCTTCATTGCCGGATGTAGAAGCAGAGGACCATAAGAATACTTCTGAGAACTTGGAAGCTGAGGCACAAGCTGCAGAATCTGAGGAACCTGTAGCAGGAGAGGACATTGTGTTGAAGGCTGATAATGGATTTTCTAATGTTCTACATAATACTTATGAGAATACTTCTGCTGGAGAGGACGTTGTTCCTCAGCAGGTTACAGTTGAATCTGCTGGAAGTAGTTGCAAATTTAACTCACCAGTTGATGGTGATGTTGTTTCAGAAGATACTGCCATTCCAAACCAGGAGCCTCGAGTCTCTTCGGAGACTATGACAGAAGACTCTATCCACGAGCAGAAGAGTACTGATATTCCAGTTCAATCAGTTGTTTCTGACCAGTTGAAGGAAAACGTGACCTCTGATGAACTACATAATAAGAGTATGGGGGAACTGAAGAGGATGCTGAAGAAGTTAAAGCTAGATGACAAATCAAAGACTAATGTTGTTAAGGAAGTGGAGAAGAAAAGAACTGCTCTGCAGGTACTGCCACAGAATCGGATGACAGCTGGTGAAGTTCAGATTGATGGCTGA 2058 0.4417 MDFHALSRKQLQTLCKKNKIPANITNVAMADALAALNQVEGLDEFLNPTDGDAGTPSVHHRTAGRASTQRKGAREEAEGSKVKVSTRPQRGARAAEGVVEQENKDANVPVTPAAASRRRATAVSTRRKKEVEMVVQDADNKNEVQGKPKPADVPKTPAVAPVSRTRATGRSVCTTKIETPAGTSAQRAYSTRRSVRLLEKDLSKMSLMDTDDTGLELEVCSSENNTEYECQSHDSGSDVKLVSVTENVMVVEPHGSKEDEQEKVNCLELEAEPHGSDEADIAAVSVVVSDDVSVDVTDQDVGGSFPMLAECNMDDQVSNEVDDKEDKNNDQDVNDASVSLKELVECNMDDQVSNEGDDKEDKNNVPAEEAELHDSNLILEGSYDTCDKSNDADALTEVTGQDTATLTVVVPDDVSDQEVAGWLPMSPVNDAPVNIKEFVECNIDDDQGNYMADEYYQHPLNIDEKAADESELMTDSEGILELESISHSAVKNVTIESSLPDVEAEDHKNTSENLEAEAQAAESEEPVAGEDIVLKADNGFSNVLHNTYENTSAGEDVVPQQVTVESAGSSCKFNSPVDGDVVSEDTAIPNQEPRVSSETMTEDSIHEQKSTDIPVQSVVSDQLKENVTSDELHNKSMGELKRMLKKLKLDDKSKTNVVKEVEKKRTALQVLPQNRMTAGEVQIDG 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3120 685 MobiDBLite consensus disorder prediction 68 83 - -
Ssu3g3120 685 PANTHER ASPARTIC/GLUTAMIC ACID-RICH PROTEIN 1 680 - -
Ssu3g3120 685 MobiDBLite consensus disorder prediction 125 148 - -
Ssu3g3120 685 Coils Coil 504 524 - -
Ssu3g3120 685 MobiDBLite consensus disorder prediction 499 526 - -
Ssu3g3120 685 MobiDBLite consensus disorder prediction 589 613 - -
Ssu3g3120 685 PANTHER ASPARTIC/GLUTAMIC ACID-RICH PROTEIN 1 680 - -
Ssu3g3120 685 MobiDBLite consensus disorder prediction 349 373 - -
Ssu3g3120 685 MobiDBLite consensus disorder prediction 352 373 - -
Ssu3g3120 685 MobiDBLite consensus disorder prediction 47 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3120 Ssu-Chr3 87121905 87125393 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3120 - - gmx:100793550 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3120 3 87121905 87125393 Ssu3g3120 3 87121905 87125393 ECH