Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3119 ATGTCATCTTCCCAGCTCAGAAGGGAGTTTCCTTATCATGGTTCTTTGGTTGGAGGGACTGAATATACTTTTCTGGATGATGTTGAATCTGATTCTTCAGAAACAGCTTCTACAGATTCTGATTCTGATTCTTCTGAGACAGAACCAGACATGGATGAAGAGATGACTATATTTCAGGATGTTCCTATAATTGCAGAAAATGGTCATGATGCTGAAGAACATGAAAGCACTAGCAGTGAGGAGCTTGATGAATTAGCAATTTCCGGTGACATGCCTCACCTTTATCCTCGTGACCTAATAACATGTGATGAAGCTGTGTCTAAATGGCAACTAAAAGGGAAAAGGAATAATCGGAATCTTGTAAAGAGGTCTGTTGGTGCTTCTGATGGAAAATGTATTATGTATGGAGCAGGAGCAGATGTTGAAGGAAGGAATAGTCATTTAAGGCACAATAGAATGGGTCCAGGTTTGCACCGCtacaaatttgattttggtgatacttttgatgatgatgatcaaaGTTTTGGACTGGAAGATGAATACTCTCTAACTTCTAGATCTATATCAAACAGTCAAAGTAAAATTCATCGTGGGGTAGCTTGGAATGATTGGGCCTGGGATGATCATCTTGCTTCAAAAGGATACTGGGATGTCAAAGCATATTCTCCAATATATGGTGATCGTAATCATTTTGGTGGGAGGGTGAGGCCGATTCTGGTTAATGTAGATTTGAAGGTTCAAGGAAGCTATCGGAAAGAGCATGTACCCTTCATTTCTCTCATGAGTAAATTAGATGGGAGGGCAATAGTAGGGCACCCAATCCAGGTTGAGGCTCTCAAGGATGGTTCATCTGATATTCTATTTCCTGCAATCGATGACTTCGGTAATGATGGGACTGGTATTGAGGGAAGTAGTGTGCTTCCACCAGCATGGAGGACTGCAAGGAGAACCGCAAATTTCCGCGTCCCACGCCTCCATGTGCCATCATCAAATGGTGCTGAAGTTGCTGCAGAGTTTCCCTCTTCAGATCAAGAacaaaactttgaatataaaagtttaaatgctAGAAGTTCCAGTCAACAGGCTAGCCTTCAAAAGAAGAGTGGCCTTAAAAGTCATCGGTCTTCAGCTGACAAAAAGTCCTTAAAAAAGGTGCCAAAGAAATTGAGCTTGTCATCTAGCCAAAAAACTAGAACTCTGTCCTCATTATCTACTGAACATAATCTTAGTAGAAAGCCATTACATGATAGCAGTATTTATCAAACAGATAGATTGATTAAACCAGAAATCTCTGGGCCTACTACAGTAGCTTGCATACCAGTCCAGTTAGTATTTAGTAGATTACTTGAGAAGATTAATAGGCCTCCATTGAAAACAGCTAGTAATGCGGCTTTGCTGAATACTGGTGTGGAGAGAAATTCATAG 1425 0.393 MSSSQLRREFPYHGSLVGGTEYTFLDDVESDSSETASTDSDSDSSETEPDMDEEMTIFQDVPIIAENGHDAEEHESTSSEELDELAISGDMPHLYPRDLITCDEAVSKWQLKGKRNNRNLVKRSVGASDGKCIMYGAGADVEGRNSHLRHNRMGPGLHRYKFDFGDTFDDDDQSFGLEDEYSLTSRSISNSQSKIHRGVAWNDWAWDDHLASKGYWDVKAYSPIYGDRNHFGGRVRPILVNVDLKVQGSYRKEHVPFISLMSKLDGRAIVGHPIQVEALKDGSSDILFPAIDDFGNDGTGIEGSSVLPPAWRTARRTANFRVPRLHVPSSNGAEVAAEFPSSDQEQNFEYKSLNARSSSQQASLQKKSGLKSHRSSADKKSLKKVPKKLSLSSSQKTRTLSSLSTEHNLSRKPLHDSSIYQTDRLIKPEISGPTTVACIPVQLVFSRLLEKINRPPLKTASNAALLNTGVERNS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3119 474 MobiDBLite consensus disorder prediction 353 370 - -
Ssu3g3119 474 MobiDBLite consensus disorder prediction 23 52 - -
Ssu3g3119 474 PANTHER T17B22.17 PROTEIN-RELATED 1 472 IPR044679 -
Ssu3g3119 474 MobiDBLite consensus disorder prediction 387 408 - -
Ssu3g3119 474 MobiDBLite consensus disorder prediction 353 415 - -
Ssu3g3119 474 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 1 472 - -
Ssu3g3119 474 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3119 Ssu-Chr3 87092899 87095194 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3119 - - gmx:102667517 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3119 3 87092899 87095194 Ssu3g3119 3 87092899 87095194 ECH