Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3117 ATGAAGAATTGGTCGAAGGAGGGATGGAGGTGGCTATCTAAGATTACTAGGTCGGGTGTTGATTTTCAGGGAAATGTTGCTGCCAGGCATAATCCGGCGATCGTGACTCGGCGATTTGGAAGCGGCGTTAACGGTGGAAACGACGTGGAACTTCATCAGTTGACGAGGGACTTCCTCGTGAAGCTTTGGGTTGAtgatagaaaaatgagaaaCCCAAGAGGAAAGGCGGGGAGGAAATTAGTTAAACATGGTGACCCCAGGTGGTTTTCCGCTTCATCTGGTGTCGTCAGGAGAGGTAAACGACGGCCCGTTTTGAAGCAACCCCCTATCAGTCAATCTGTCTCTGAATTTTTCGATCCACAGTCTCCCCAAGAGGCCAAGGTAGCACCACTGCTTGCCAGGTCCAACTTGCTAATTACCAGAGATATCGAGTGGGCAAATCTTGTATTGGGCTTTGAACAGGAAAATCGTTATGCCATTGTAGATGCTTGCTACCCTCAGTCGCCTGTAGGTTTTATTCGTGAACAGAGCAACATCATTACCAGACAGTTGCTTCGTCTAAGGCGGCCTTTTGTTGCATACATAACTGATGCCTTGGGAAACGAGCTCTTTAGGGTTCGCAGACCCTTTTGGTGGATAACAAGCTCCATTTACGCAGAAATTGATGGTAAGGAAGTTGGAGTAGTTCACAGGCGATGGCATCTCTGGAGGAGAATCTATGATTTGTACCTAGGGAATAAGCAATTTGCTGTGGTTGAGAATCCTGGCTTATGGAATTGGACTTTCACATTGAAAGATATTAATGGTGAGGTGCTTGCTCAAATAGACCGTGATTGGAGGGGTTTTGGCTTTGAGATTTTGACTGATGCTGGTCAGTATGTGATTCGATTTGGGAGTTCTGATCCCAGCTCCAAGATTGGCCTTGCTTCTGCAATTGAAGACCTGGAAGTCAGTCGCACGCTGACCCTTGCAGAGAGAGCTGTAACTGTAGCTCTTGCTATATCACTAGATAATGACTACTTCTCAAGACACGGAGGCTGGGGACTACCCTTCCTTGTCGCCGAAgagtaa 1071 0.465 MKNWSKEGWRWLSKITRSGVDFQGNVAARHNPAIVTRRFGSGVNGGNDVELHQLTRDFLVKLWVDDRKMRNPRGKAGRKLVKHGDPRWFSASSGVVRRGKRRPVLKQPPISQSVSEFFDPQSPQEAKVAPLLARSNLLITRDIEWANLVLGFEQENRYAIVDACYPQSPVGFIREQSNIITRQLLRLRRPFVAYITDALGNELFRVRRPFWWITSSIYAEIDGKEVGVVHRRWHLWRRIYDLYLGNKQFAVVENPGLWNWTFTLKDINGEVLAQIDRDWRGFGFEILTDAGQYVIRFGSSDPSSKIGLASAIEDLEVSRTLTLAERAVTVALAISLDNDYFSRHGGWGLPFLVAEE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3117 356 Pfam Scramblase 116 343 IPR005552 GO:0017121|GO:0017128
Ssu3g3117 356 PANTHER PHOSPHOLIPID SCRAMBLASE-RELATED 99 350 IPR005552 GO:0017121|GO:0017128
Ssu3g3117 356 SUPERFAMILY Tubby C-terminal domain-like 194 296 IPR025659 -
Ssu3g3117 356 PANTHER PHOSPHOLIPID SCRAMBLASE 99 350 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3117 - - gmx:100784576 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3117 3 87080235 87086382 Ssu3g3117 3 87080235 87086382 ECH